RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 KCNMB3Q9NPA1 279 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 GPRC5CQ9NQ84 441 aa13.09□□□□□ -0.31
DDX39B-208ENST00000428098 DDX25Q9UHL0 483 aaKnown RBP13.09□□□□□ -0.31
DDX39B-208ENST00000428098 SYN3O14994 580 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 N4BP3O15049 544 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 RDXP35241 583 aaKnown RBP13.08□□□□□ -0.32
DDX39B-208ENST00000428098 PTGER3P43115 390 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 DUSP4Q13115 394 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 NTRK3Q16288 839 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 FAM187BQ17R55 369 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 MOXD1Q6UVY6 613 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 DHX32Q7L7V1 743 aaKnown RBP13.08□□□□□ -0.32
DDX39B-208ENST00000428098 DNAJB7Q7Z6W7 309 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-208ENST00000428098 BEST2Q8NFU1 509 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 OR2I1PQ8NGU4 316 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 ADAMTS14Q8WXS8 1223 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 SLC39A7Q92504 469 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 PRIMPOLQ96LW4 560 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 NUSAP1Q9BXS6 441 aaKnown RBP13.08□□□□□ -0.32
DDX39B-208ENST00000428098 SLC46A2Q9BY10 475 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 POLR3FQ9H1D9 316 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-208ENST00000428098 PRMT7Q9NVM4 692 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-208ENST00000428098 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-208ENST00000428098 MAFFQ9ULX9 164 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 SLC27A5Q9Y2P5 690 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 SPTA1P02549 2419 aa13.08□□□□□ -0.32
DDX39B-208ENST00000428098 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 LRRIQ4A6NIV6 560 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 PODXLO00592 558 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 DGAT1O75907 488 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 OR4Q2P0C623 313 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 ARSAP15289 507 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 DRD1P21728 446 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 WEE1P30291 646 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 MCM2P49736 904 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 NLRP5P59047 1200 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 PTPAQ15257 358 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 NPY5RQ15761 445 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 ADCK5Q3MIX3 580 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 SLC23A3Q6PIS1 610 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 ALKAL1Q6UXT8 129 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 ARMCX6Q7L4S7 300 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 MAEAQ7L5Y9 396 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 RASSF3Q86WH2 238 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 TMEFF1Q8IYR6 380 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 RIN3Q8TB24 985 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 RLN3Q8WXF3 142 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 FAM20AQ96MK3 541 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 ZMAT2Q96NC0 199 aaKnown RBP13.07□□□□□ -0.32
DDX39B-208ENST00000428098 PGLYRP2Q96PD5 576 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 FNBP1Q96RU3 617 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 TPCN1Q9ULQ1 816 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 TBX20Q9UMR3 447 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 RAI2Q9Y5P3 530 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 ADAMTS9Q9P2N4 1935 aa13.07□□□□□ -0.32
DDX39B-208ENST00000428098 ARID2Q68CP9 1835 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 TNFRSF10BO14763 440 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 SOAT2O75908 522 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 GABRR2P28476 465 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 RCAN1P53805 252 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 EPHB3P54753 998 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 CYP4F8P98187 520 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 PRPF4BQ13523 1007 aaKnown RBP13.06□□□□□ -0.32
DDX39B-208ENST00000428098 TRIP6Q15654 476 aaKnown RBP13.06□□□□□ -0.32
DDX39B-208ENST00000428098 INF2Q27J81 1249 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 CDCA2Q69YH5 1023 aaPredicted RBP13.06□□□□□ -0.32
DDX39B-208ENST00000428098 NCAPH2Q6IBW4 605 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 SLCO6A1Q86UG4 719 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 C11orf74Q86VG3 221 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 SYT12Q8IV01 421 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 TMEM130Q8N3G9 435 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 TSTD1Q8NFU3 115 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 OLIG1Q8TAK6 271 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 P2RY13Q9BPV8 354 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 HSD17B14Q9BPX1 270 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 TASP1Q9H6P5 420 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 THG1LQ9NWX6 298 aaKnown RBP13.06□□□□□ -0.32
DDX39B-208ENST00000428098 PCDHA4Q9UN74 947 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 CCL26Q9Y258 94 aa13.06□□□□□ -0.32
DDX39B-208ENST00000428098 CCDC196A0A1B0GTZ2 297 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 ACKR2O00590 384 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 SH3BP5O60239 455 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 HNRNPLP14866 589 aaKnown RBP eCLIP13.05□□□□□ -0.32
DDX39B-208ENST00000428098 CPB1P15086 417 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 GJA4P35212 333 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 FBXO43Q4G163 708 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 XKR4Q5GH76 650 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 NT5DC1Q5TFE4 455 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 ANO7Q6IWH7 933 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 ZNF605Q86T29 641 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 MARCH9Q86YJ5 346 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 TTC9BQ8N6N2 239 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 DDX12PQ92771 950 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 C18orf25Q96B23 403 aaPredicted RBP13.05□□□□□ -0.32
DDX39B-208ENST00000428098 SUSD3Q96L08 255 aa13.05□□□□□ -0.32
DDX39B-208ENST00000428098 UBL7Q96S82 380 aaPredicted RBP13.05□□□□□ -0.32
DDX39B-208ENST00000428098 GTPBP2Q9BX10 602 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms