RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 ASIC1P78348 528 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 PFKPQ01813 784 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 KCNA1Q09470 495 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 E2F4Q16254 413 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 SV2CQ496J9 727 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 CNNM4Q6P4Q7 775 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 BRSK2Q8IWQ3 736 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 THEM5Q8N1Q8 247 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 GPR152Q8TDT2 470 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 ING5Q8WYH8 240 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 SHDQ96IW2 340 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 TRIM9Q9C026 710 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 ASAH2Q9NR71 780 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 ARHGEF3Q9NR81 526 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 RBAKQ9NYW8 714 aaPredicted RBP11□□□□□ -0.65
COMMD1-202ENST00000427417 HSFX1Q9UBD0 423 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 GTF3C3Q9Y5Q9 886 aa11□□□□□ -0.65
COMMD1-202ENST00000427417 TULP1O00294 542 aaPredicted RBP10.99□□□□□ -0.65
COMMD1-202ENST00000427417 CYB561D2O14569 222 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 PPEF2O14830 753 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 SPTLC1O15269 473 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 EIF3DO15371 548 aaKnown RBP eCLIP10.99□□□□□ -0.65
COMMD1-202ENST00000427417 POLR2DO15514 142 aaKnown RBP10.99□□□□□ -0.65
COMMD1-202ENST00000427417 EXTL3O43909 919 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 ECI2O75521 394 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 PRPF6O94906 941 aaKnown RBP10.99□□□□□ -0.65
COMMD1-202ENST00000427417 ALDH1A3P47895 512 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 TFAMQ00059 246 aaKnown RBP10.99□□□□□ -0.65
COMMD1-202ENST00000427417 SMARCB1Q12824 385 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 SLC5A9Q2M3M2 681 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 FOXD4L6Q3SYB3 417 aaPredicted RBP10.99□□□□□ -0.65
COMMD1-202ENST00000427417 PRSS36Q5K4E3 855 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 PHLDB3Q6NSJ2 640 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 POTEHQ6S545 545 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 SHC4Q6S5L8 630 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 FOXD4L3Q6VB84 417 aaPredicted RBP10.99□□□□□ -0.65
COMMD1-202ENST00000427417 EFCAB13Q8IY85 973 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 GPD1LQ8N335 351 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 ATOH1Q92858 354 aaPredicted RBP10.99□□□□□ -0.65
COMMD1-202ENST00000427417 SAAL1Q96ER3 474 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 MCRS1Q96EZ8 462 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 PGLYRP2Q96PD5 576 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 C7orf25Q9BPX7 421 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 GPR88Q9GZN0 384 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 IKZF4Q9H2S9 585 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 KIAA1586Q9HCI6 787 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 R3HCC1Q9Y3T6 440 aaKnown RBP10.99□□□□□ -0.65
COMMD1-202ENST00000427417 YIPF1Q9Y548 306 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 ASB3Q9Y575 518 aa10.99□□□□□ -0.65
COMMD1-202ENST00000427417 MTMR11A4FU01 709 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 KPNA7A9QM74 516 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 NRG2O14511 850 aaPredicted RBP10.98□□□□□ -0.65
COMMD1-202ENST00000427417 FGF19O95750 216 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 OR4Q2P0C623 313 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 CEBPBP17676 345 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 TUFMP49411 452 aaKnown RBP10.98□□□□□ -0.65
COMMD1-202ENST00000427417 EPHA5P54756 1037 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 GPC5P78333 572 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 DUSP4Q13115 394 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 SURF1Q15526 300 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 FAM26FQ5R3K3 315 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 CENPPQ6IPU0 288 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 ITIH5Q86UX2 942 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 CEP57L1Q8IYX8 460 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 LRRC52Q8N7C0 313 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 NOC3LQ8WTT2 800 aaKnown RBP10.98□□□□□ -0.65
COMMD1-202ENST00000427417 C2orf15Q8WU43 125 aaKnown RBP10.98□□□□□ -0.65
COMMD1-202ENST00000427417 ELSPBP1Q96BH3 223 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 CBWD1Q9BRT8 395 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 PCIF1Q9H4Z3 704 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 TBC1D17Q9HA65 648 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 ZFP14Q9HCL3 533 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 CEP72Q9P209 647 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 ITGA11Q9UKX5 1188 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 PCDHA7Q9UN72 937 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 UBE4BO95155 1302 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 ANK1P16157 1881 aa10.98□□□□□ -0.65
COMMD1-202ENST00000427417 PVALEFA0A1B0GWK0 134 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 GOLGA8IPA6NC78 632 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 ZNF233A6NK53 670 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 GOLGA8JA6NMD2 632 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 ITGB3P05106 788 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 TMEM191BP0C7N4 346 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 MYL4P12829 197 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 POLR2BP30876 1174 aaKnown RBP10.97□□□□□ -0.65
COMMD1-202ENST00000427417 SNRPFP62306 86 aaKnown RBP10.97□□□□□ -0.65
COMMD1-202ENST00000427417 PRKCQQ04759 706 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 DNM1Q05193 864 aaKnown RBP10.97□□□□□ -0.65
COMMD1-202ENST00000427417 VEPH1Q14D04 833 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 MLF2Q15773 248 aaPredicted RBP10.97□□□□□ -0.65
COMMD1-202ENST00000427417 SLC39A12Q504Y0 691 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 RESP18Q5W5W9 173 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 UNC13DQ70J99 1090 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 CCDC105Q8IYK2 499 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 DCP1BQ8IZD4 617 aaKnown RBP10.97□□□□□ -0.65
COMMD1-202ENST00000427417 CSGALNACT2Q8N6G5 542 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 ZNF507Q8TCN5 953 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 SPPL2BQ8TCT7 592 aa10.97□□□□□ -0.65
COMMD1-202ENST00000427417 TCEAL4Q96EI5 215 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms