RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 P4HA3Q7Z4N8 544 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PIGWQ7Z7B1 504 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MCPH1Q8NEM0 835 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MYRIPQ8NFW9 859 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 METTL21AQ8WXB1 218 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 BRI3BPQ8WY22 251 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PRR11Q96HE9 360 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 SCLYQ96I15 445 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PDLIM2Q96JY6 352 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PPP1R13BQ96KQ4 1090 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 FBXL18Q96ME1 805 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 EXOC1Q9NV70 894 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MUTYHQ9UIF7 546 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 RASGRF2O14827 1237 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MAFGO15525 162 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 KCNQ3O43525 872 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ANXA5P08758 320 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 TNNT1P13805 278 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MSNP26038 577 aaKnown RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 GEMIN4P57678 1058 aaKnown RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 FOXM1Q08050 763 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CDC37Q16543 378 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ITPRIPL2Q3MIP1 535 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CEP55Q53EZ4 464 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 RNF135Q8IUD6 432 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MYCT1Q8N699 235 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ZNF397Q8NF99 534 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 TTC8Q8TAM2 541 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PLEKHO2Q8TD55 490 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MORC4Q8TE76 937 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CTNNBL1Q8WYA6 563 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 KCNJ9Q92806 393 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ADAMTS10Q9H324 1103 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 C12orf65Q9H3J6 166 aaKnown RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 KMT5AQ9NQR1 393 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ST7Q9NRC1 585 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 NFU1Q9UMS0 254 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 COL5A3P25940 1745 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CICQ96RK0 1608 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 NFKBIEO00221 500 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ARHGAP6O43182 974 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 NBNO60934 754 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MTA2O94776 668 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ATG7O95352 703 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PTPRAP18433 802 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 DDX6P26196 483 aaKnown RBP eCLIP3.77□□□□□ -1.818e-13■■□□□ 12.8
TOP2A-201ENST00000423485 AXLP30530 894 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 BMPR1AP36894 532 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 TOB1P50616 345 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CACNB2Q08289 660 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 TAF11Q15544 211 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 DIXDC1Q155Q3 683 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ZNF568Q3ZCX4 644 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ATP13A4Q4VNC1 1196 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 SNAP47Q5SQN1 464 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 HLA-DQA1Q5Y7H0 255 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 LYSMD3Q7Z3D4 306 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 GKN2Q86XP6 184 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 RIOX2Q8IUF8 465 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 SLC44A3Q8N4M1 653 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 ASAP3Q8TDY4 903 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CXorf40AQ8TE69 158 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 C5orf34Q96MH7 638 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 SLC26A6Q9BXS9 759 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 RSAD1Q9HA92 442 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 JPH1Q9HDC5 661 aaPredicted RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 CALCOCO1Q9P1Z2 691 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 LARSQ9P2J5 1176 aaKnown RBP3.77□□□□□ -1.81
TOP2A-201ENST00000423485 AFG3L2Q9Y4W6 797 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 PXDNLA1KZ92 1463 aa3.77□□□□□ -1.81
TOP2A-201ENST00000423485 MAST2Q6P0Q8 1798 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 NCANO14594 1321 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 FAM95CA0A1B0GW59 222 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 SOWAHDA6NJG2 315 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 CACNB4O00305 520 aaPredicted RBP3.76□□□□□ -1.81
TOP2A-201ENST00000423485 LDHAP00338 332 aaKnown RBP3.76□□□□□ -1.81
TOP2A-201ENST00000423485 ABOP16442 354 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 CCT8P50990 548 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 EFNA5P52803 228 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 TOB2Q14106 344 aaPredicted RBP3.76□□□□□ -1.81
TOP2A-201ENST00000423485 CBX2Q14781 532 aaPredicted RBP3.76□□□□□ -1.81
TOP2A-201ENST00000423485 MLF2Q15773 248 aaPredicted RBP3.76□□□□□ -1.81
TOP2A-201ENST00000423485 RILPL1Q5EBL4 403 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 TCEAL5Q5H9L2 206 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 TOR1AIP1Q5JTV8 583 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 CDC42EP5Q6NZY7 148 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 ZSCAN30Q86W11 494 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 APLFQ8IW19 511 aaPredicted RBP3.76□□□□□ -1.81
TOP2A-201ENST00000423485 CD101Q93033 1021 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 TMEM125Q96AQ2 219 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 FAM149B1Q96BN6 582 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 C17orf62Q9BQA9 187 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 YIPF4Q9BSR8 244 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 OSBPL2Q9H1P3 480 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 ALG2Q9H553 416 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 BCL2L12Q9HB09 334 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 MTMR10Q9NXD2 777 aa3.76□□□□□ -1.81
TOP2A-201ENST00000423485 FEZ2Q9UHY8 353 aaPredicted RBP3.76□□□□□ -1.81
TOP2A-201ENST00000423485 PPME1Q9Y570 386 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms