RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ZBTB6Q15916 424 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 LARP1BQ659C4 914 aaKnown RBP17.52■□□□□ 0.4
COL18A1-205ENST00000423214 JADE1Q6IE81 842 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 ARMCX5Q6P1M9 558 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 BRAPQ7Z569 592 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 CD302Q8IX05 232 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 SHKBP1Q8TBC3 707 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 LARP4BQ92615 738 aaKnown RBP17.52■□□□□ 0.4
COL18A1-205ENST00000423214 RAD54LQ92698 747 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 SECISBP2LQ93073 1101 aaKnown RBP17.52■□□□□ 0.4
COL18A1-205ENST00000423214 ZSWIM3Q96MP5 696 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 GPR88Q9GZN0 384 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 ZNF334Q9HCZ1 680 aaPredicted RBP17.52■□□□□ 0.4
COL18A1-205ENST00000423214 PRMT8Q9NR22 394 aaPredicted RBP17.52■□□□□ 0.4
COL18A1-205ENST00000423214 BLOC1S4Q9NUP1 217 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 ZSCAN32Q9NX65 697 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 PIAS3Q9Y6X2 628 aa17.52■□□□□ 0.4
COL18A1-205ENST00000423214 GPR179Q6PRD1 2367 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 A0A0B4J269 797 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 A0A1W2PRU2 124 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 MTMR11A4FU01 709 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 PPEF2O14830 753 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 FAM189A1O60320 539 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 MOSPD3O75425 235 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 VIPR2P41587 438 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 DUSP4Q13115 394 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 GPR17Q13304 367 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 MYBPC2Q14324 1141 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 PPP2R5DQ14738 602 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 SPATA1Q5VX52 437 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 MAP4K3Q8IVH8 894 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 SUMF1Q8NBK3 374 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 CSGALNACT1Q8TDX6 532 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 FAM3CQ92520 227 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 E2F7Q96AV8 911 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 SENP8Q96LD8 212 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 IER2Q9BTL4 223 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 TRPV4Q9HBA0 871 aa17.51■□□□□ 0.39
COL18A1-205ENST00000423214 SMG5Q9UPR3 1016 aaKnown RBP17.51■□□□□ 0.39
COL18A1-205ENST00000423214 HEPACAM2A8MVW5 462 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 VNN2O95498 520 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 NFICP08651 508 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 PAX3P23760 479 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 MTAPQ13126 283 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 TSSK4Q6SA08 328 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 TMC8Q8IU68 726 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 MFSD6LQ8IWD5 586 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 DCLK2Q8N568 766 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 LRRC15Q8TF66 581 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 RMDN1Q96DB5 314 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 DNAJC25Q9H1X3 360 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 CHRDQ9H2X0 955 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 TRPV5Q9NQA5 729 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 CPSF3Q9UKF6 684 aaKnown RBP17.5■□□□□ 0.39
COL18A1-205ENST00000423214 DERAQ9Y315 318 aa17.5■□□□□ 0.39
COL18A1-205ENST00000423214 SPAG17Q6Q759 2223 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 NCANO14594 1321 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 HELZP42694 1942 aaKnown RBP17.49■□□□□ 0.39
COL18A1-205ENST00000423214 VPS37CA5D8V6 355 aaPredicted RBP17.49■□□□□ 0.39
COL18A1-205ENST00000423214 DPYSL4O14531 572 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 FGF19O95750 216 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 NMT1P30419 496 aaKnown RBP17.49■□□□□ 0.39
COL18A1-205ENST00000423214 ACOT2P49753 483 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 LILRA4P59901 499 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 VEPH1Q14D04 833 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 SF3A1Q15459 793 aaKnown RBP17.49■□□□□ 0.39
COL18A1-205ENST00000423214 ARHGAP15Q53QZ3 475 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 C9orf57Q5W0N0 161 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 ADALQ6DHV7 355 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 SLC39A4Q6P5W5 647 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 DGLUCYQ7Z3D6 616 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 ITIH5Q86UX2 942 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 TTC9BQ8N6N2 239 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 KRI1Q8N9T8 703 aaKnown RBP17.49■□□□□ 0.39
COL18A1-205ENST00000423214 ZBTB44Q8NCP5 570 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 FAM200AQ8TCP9 573 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 MSANTD3Q96H12 275 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 GCNAQ96QF7 691 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 SEPT5Q99719 369 aaPredicted RBP17.49■□□□□ 0.39
COL18A1-205ENST00000423214 FAM126AQ9BYI3 521 aaPredicted RBP17.49■□□□□ 0.39
COL18A1-205ENST00000423214 CRISPLD1Q9H336 500 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 SLC27A5Q9Y2P5 690 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 ASB3Q9Y575 518 aa17.49■□□□□ 0.39
COL18A1-205ENST00000423214 DNAH14Q0VDD8 3507 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 SHISA7A6NL88 538 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 ADRB2P07550 413 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 CCR3P51677 355 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 KPNA1P52294 538 aaPredicted RBP17.48■□□□□ 0.39
COL18A1-205ENST00000423214 NRLP54845 237 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 GTF2BQ00403 316 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 GRIN1Q05586 938 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 SLC39A12Q504Y0 691 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 SLFN12LQ6IEE8 588 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 CENPPQ6IPU0 288 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 METTL23Q86XA0 190 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 ATAD1Q8NBU5 361 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 PSMG2Q969U7 264 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 TMEM209Q96SK2 561 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 BACH2Q9BYV9 841 aa17.48■□□□□ 0.39
COL18A1-205ENST00000423214 EPC1Q9H2F5 836 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms