RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 P3H4Q92791 437 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 GAD1Q99259 594 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 PLAGL2Q9UPG8 496 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 HEXIM1O94992 359 aaKnown RBP10.29□□□□□ -0.76
CMSS1-201ENST00000421999 CKMP06732 381 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 CYP4A22Q5TCH4 519 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 GPAT2Q6NUI2 795 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 SLC27A1Q6PCB7 646 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MICALCLQ6ZW33 695 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 TRAPPC11Q7Z392 1133 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 TADA2BQ86TJ2 420 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 ACOT1Q86TX2 421 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 CD302Q8IX05 232 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 NDUFAF2Q8N183 169 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 PGBD3Q8N328 593 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 STKLD1Q8NE28 680 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 DHX38Q92620 1227 aaKnown RBP10.29□□□□□ -0.76
CMSS1-201ENST00000421999 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.29□□□□□ -0.76
CMSS1-201ENST00000421999 RBM41Q96IZ5 413 aaKnown RBP10.29□□□□□ -0.76
CMSS1-201ENST00000421999 TMEM117Q9H0C3 514 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 PFDN4Q9NQP4 134 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 TRIM10Q9UDY6 481 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 SLC45A1Q9Y2W3 748 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 SH3BP1Q9Y3L3 701 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 CDY2AQ9Y6F7 541 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 POC1B-GALNT4F8VUJ3 575 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 TGFB1I1O43294 461 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 TJP3O95049 919 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 CPP00450 1065 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 KRT7P08729 469 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 ADCY1Q08828 1119 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 ZNF211Q13398 564 aaPredicted RBP10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MTHFD1LQ6UB35 978 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 KIAA0319LQ8IZA0 1049 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 TMC2Q8TDI7 906 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 FBF1Q8TES7 1133 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 SMYD2Q9NRG4 433 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 ZMYND10O75800 440 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MYL6P60660 151 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 DLG4P78352 724 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 RAD51Q06609 339 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MAPRE1Q15691 268 aaKnown RBP10.29□□□□□ -0.76
CMSS1-201ENST00000421999 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 DCAF6Q58WW2 860 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 PPP4R1Q8TF05 950 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 BSNDQ8WZ55 320 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 TTC1Q99614 292 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MAF1Q9H063 256 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 RSAD1Q9HA92 442 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MAFBQ9Y5Q3 323 aaPredicted RBP10.29□□□□□ -0.76
CMSS1-201ENST00000421999 SSU72P8A0A1W2PR75 194 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 F5H423 210 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 HGSO14964 777 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 B4GALT5O43286 388 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 AP1G2O75843 785 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 HSPA6P17066 643 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 BRD2P25440 801 aaKnown RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 HTRA3P83110 453 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 MTMR3Q13615 1198 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 ZNF449Q6P9G9 518 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 MYLK4Q86YV6 388 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 FAM84AQ96KN4 292 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 MED15Q96RN5 788 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 SP110Q9HB58 689 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 PARVAQ9NVD7 372 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 KANSL3Q9P2N6 904 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 IP6K2Q9UHH9 426 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 HES2Q9Y543 173 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 COL24A1Q17RW2 1714 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 A0A1W2PQJ5 194 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 MIF4GDA9UHW6 222 aaKnown RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 RGS16O15492 202 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 AMHP03971 560 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 GALCP54803 685 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 SF3A3Q12874 501 aaKnown RBP eCLIP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 MKRN4PQ13434 485 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 ITGA7Q13683 1181 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 CBWD6Q4V339 395 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 CBWD3Q5JTY5 395 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 CBWD5Q5RIA9 395 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 C10orf120Q5SQS8 335 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 MIB1Q86YT6 1006 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 TMEM199Q8N511 208 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 SCYL1Q96KG9 808 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 CGRRF1Q99675 332 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 EPAS1Q99814 870 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 CHORDC1Q9UHD1 332 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 PACSIN2Q9UNF0 486 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 LOC102724159A0A0B4J2E5 919 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 LRRC10BA6NIK2 292 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 PMLP29590 882 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 RAB27AP51159 221 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 ELAVL2Q12926 359 aaKnown RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 DRP2Q13474 957 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 PWP2Q15269 919 aaKnown RBP10.28□□□□□ -0.76
CMSS1-201ENST00000421999 MAP7D1Q3KQU3 841 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 FBXO47Q5MNV8 452 aa10.28□□□□□ -0.76
CMSS1-201ENST00000421999 ZNF280DQ6N043 979 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms