RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CYP11A1P05108 521 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 EPCAMP16422 314 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 GTF2H1P32780 548 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 MCCD1P59942 119 aaPredicted RBP24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 RAB33AQ14088 237 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 PUS10Q3MIT2 529 aaKnown RBP24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 LEXMQ3ZCV2 418 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 CT47A1Q5JQC4 288 aaPredicted RBP24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 TJAP1Q5JTD0 557 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 ANKRD54Q6NXT1 300 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 SASS6Q6UVJ0 657 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 RBM43Q6ZSC3 357 aaKnown RBP24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 THEM5Q8N1Q8 247 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 PLEKHA4Q9H4M7 779 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 CLEC1BQ9P126 229 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 ARMCX3Q9UH62 379 aaPredicted RBP24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 CD207Q9UJ71 328 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 BARX2Q9UMQ3 279 aaPredicted RBP24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 CDY1Q9Y6F8 540 aa24.84■■□□□ 1.57
SMARCB1-205ENST00000417137 H3BQ06 376 aaPredicted RBP24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 TBX10O75333 385 aa24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 GNA14O95837 355 aa24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 RBM10P98175 930 aaKnown RBP24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 DLX2Q07687 328 aaPredicted RBP24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 ZACNQ401N2 412 aa24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 TDRD10Q5VZ19 366 aaKnown RBP24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 SLC8B1Q6J4K2 584 aa24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 SV2AQ7L0J3 742 aa24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 DPH6Q7L8W6 267 aa24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 FRMD5Q7Z6J6 570 aa24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 FBXL5Q9UKA1 691 aa24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 SNX9Q9Y5X1 595 aa24.83■■□□□ 1.57
SMARCB1-205ENST00000417137 OR6C75A6NL08 312 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 TGM5O43548 720 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 TBC1D4O60343 1298 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 TFF2Q03403 129 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 NCOA4Q13772 614 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 CCDC40Q4G0X9 1142 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 LILRA6Q6PI73 481 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 TMEM86AQ8N2M4 240 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 TOP6BLQ8N6T0 577 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 MSLNLQ96KJ4 702 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 SRRTQ9BXP5 876 aaKnown RBP24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 FAM50BQ9Y247 325 aa24.82■■□□□ 1.56
SMARCB1-205ENST00000417137 ATG2AQ2TAZ0 1938 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 STAU1O95793 577 aaKnown RBP24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 TRIM49P0CI25 452 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 TRIM49CP0CI26 452 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 ERCC5P28715 1186 aaPredicted RBP24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 MYL6P60660 151 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 SGSM1Q2NKQ1 1148 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 C1orf220Q5T0J3 134 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 TCERG1LQ5VWI1 586 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 WSCD1Q658N2 575 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 SPATA18Q8TC71 538 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 TMEM8AQ9HCN3 771 aa24.81■■□□□ 1.56
SMARCB1-205ENST00000417137 TTC28Q96AY4 2481 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 ADAM12O43184 909 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 CLSTN1O94985 981 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 GCLMP48507 274 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 ARPP19P56211 112 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 TNNC1P63316 161 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 TPD52L1Q16890 204 aaPredicted RBP24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 DPCR1Q3MIW9 517 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 WDR72Q3MJ13 1102 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 KRT39Q6A163 491 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 SCARA3Q6AZY7 606 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 RSPO2Q6UXX9 243 aaPredicted RBP24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 KREMEN2Q8NCW0 462 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 ZNF461Q8TAF7 563 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 TAF4BQ92750 862 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 ASB2Q96Q27 587 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 MMS19Q96T76 1030 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 MAN1C1Q9NR34 630 aa24.8■■□□□ 1.56
SMARCB1-205ENST00000417137 FAM163BP0C2L3 166 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 SPATA31D3P0C874 917 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 CCDC192P0DO97 292 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 ELF1P32519 619 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 ITIH3Q06033 890 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 PPP3CAQ08209 521 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 DCAF17Q5H9S7 520 aaPredicted RBP24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 TPGS2Q68CL5 300 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 CES5AQ6NT32 575 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 C15orf39Q6ZRI6 1047 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 SPATA31D4Q6ZUB0 917 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 RTL10Q7L3V2 364 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 PDCL2Q8N4E4 241 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 CCDC150Q8NCX0 1101 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 IMPG2Q9BZV3 1241 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 MMRN2Q9H8L6 949 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 VRTNQ9H8Y1 702 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 SFXN1Q9H9B4 322 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 MAFFQ9ULX9 164 aa24.79■■□□□ 1.56
SMARCB1-205ENST00000417137 P4HA1P13674 534 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 CPB1P15086 417 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 PIK3CAP42336 1068 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 LHX1P48742 406 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 ROR1Q01973 937 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 SMAD4Q13485 552 aaKnown RBP24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 CLUL1Q15846 466 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms