RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TYMPP19971 482 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 SCP2P22307 547 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 LILRA4P59901 499 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 GRIN1Q05586 938 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 OVOS1Q6IE37 1185 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 JADE1Q6IE81 842 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 CENPPQ6IPU0 288 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 SLC39A4Q6P5W5 647 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 MFSD6LQ8IWD5 586 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 FAM212AQ96EL1 285 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 SENP8Q96LD8 212 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 GPR88Q9GZN0 384 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 CPSF3Q9UKF6 684 aaKnown RBP16.09■□□□□ 0.17
RPS28-201ENST00000417088 SMC3Q9UQE7 1217 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 SLC27A5Q9Y2P5 690 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 A0A1W2PRU2 124 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 MTMR11A4FU01 709 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 HEPACAM2A8MVW5 462 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 ARNTLO00327 626 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 ZNF263O14978 683 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 LONP1P36776 959 aaKnown RBP16.08■□□□□ 0.16
RPS28-201ENST00000417088 EPHB3P54753 998 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 PLD1Q13393 1074 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 MYBPC2Q14324 1141 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 KARSQ15046 597 aaKnown RBP16.08■□□□□ 0.16
RPS28-201ENST00000417088 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.16
RPS28-201ENST00000417088 CD302Q8IX05 232 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 ATAD1Q8NBU5 361 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 FAM3CQ92520 227 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 RAD54LQ92698 747 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 RSPRY1Q96DX4 576 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 TMEM209Q96SK2 561 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 MSTO1Q9BUK6 570 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 CHRDQ9H2X0 955 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 SLITRK6Q9H5Y7 841 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 PIAS3Q9Y6X2 628 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 DNAH14Q0VDD8 3507 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 COL4A2P08572 1712 aa16.08■□□□□ 0.16
RPS28-201ENST00000417088 ANKRD63C9JTQ0 380 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 PIRO00625 290 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 KRT18P05783 430 aaKnown RBP16.07■□□□□ 0.16
RPS28-201ENST00000417088 NFICP08651 508 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 PAX3P23760 479 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 NMT1P30419 496 aaKnown RBP16.07■□□□□ 0.16
RPS28-201ENST00000417088 ALDH1A3P47895 512 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 GTF2BQ00403 316 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 C9orf57Q5W0N0 161 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 MAMSTRQ6ZN01 415 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 TTC9BQ8N6N2 239 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 E2F7Q96AV8 911 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 FAM126AQ9BYI3 521 aaPredicted RBP16.07■□□□□ 0.16
RPS28-201ENST00000417088 EPC1Q9H2F5 836 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 ZHX3Q9H4I2 956 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 LMAN1LQ9HAT1 526 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 NCDNQ9UBB6 729 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 ASB3Q9Y575 518 aa16.07■□□□□ 0.16
RPS28-201ENST00000417088 ANO9A1A5B4 782 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 TISP43B9A030 160 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 SOAT2O75908 522 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 BMP15O95972 392 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 CYP11A1P05108 521 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 ODC1P11926 461 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 TDGF1P13385 188 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 MCM2P49736 904 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 ACOT2P49753 483 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
RPS28-201ENST00000417088 ZC2HC1CQ53FD0 456 aaPredicted RBP16.06■□□□□ 0.16
RPS28-201ENST00000417088 STXBP5Q5T5C0 1151 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 ARMCX5Q6P1M9 558 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 GAREM2Q75VX8 874 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 DGLUCYQ7Z3D6 616 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 DNAJB7Q7Z6W7 309 aaPredicted RBP16.06■□□□□ 0.16
RPS28-201ENST00000417088 GPIHBP1Q8IV16 184 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 OR10T2Q8NGX3 314 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 RASSF8Q8NHQ8 419 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 LARP4BQ92615 738 aaKnown RBP16.06■□□□□ 0.16
RPS28-201ENST00000417088 PSMG2Q969U7 264 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 IER2Q9BTL4 223 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 MKNK1Q9BUB5 465 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 SMG5Q9UPR3 1016 aaKnown RBP16.06■□□□□ 0.16
RPS28-201ENST00000417088 DERAQ9Y315 318 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 TICRRQ7Z2Z1 1910 aa16.06■□□□□ 0.16
RPS28-201ENST00000417088 CHADO15335 359 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 TBCAO75347 108 aaKnown RBP16.05■□□□□ 0.16
RPS28-201ENST00000417088 CHRNB1P11230 501 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 CCNE1P24864 410 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 ABCD1P33897 745 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 MLLT6P55198 1093 aaPredicted RBP16.05■□□□□ 0.16
RPS28-201ENST00000417088 FCHO2Q0JRZ9 810 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 TMEM132DQ14C87 1099 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
RPS28-201ENST00000417088 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 ARID3BQ8IVW6 561 aaPredicted RBP16.05■□□□□ 0.16
RPS28-201ENST00000417088 YAF2Q8IY57 180 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 LRRC3BQ96PB8 259 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 ST6GALNAC4Q9H4F1 302 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 ASB7Q9H672 318 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 DLL3Q9NYJ7 618 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 HSFX1Q9UBD0 423 aa16.05■□□□□ 0.16
RPS28-201ENST00000417088 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms