RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HARSP12081 509 aaKnown RBP15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 ABCD1P33897 745 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 GJC1P36383 396 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 USP17L24Q0WX57 530 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 ORC2Q13416 577 aaPredicted RBP15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 USP17L6PQ6QN14 398 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 NME8Q8N427 588 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 DENND1AQ8TEH3 1009 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 LENG1Q96BZ8 264 aaPredicted RBP15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 AGBL1Q96MI9 1066 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 GPR88Q9GZN0 384 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 APEX2Q9UBZ4 518 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 ACTL7BQ9Y614 415 aa15.54■□□□□ 0.08
NCKIPSD-204ENST00000416649 ZMYM2Q9UBW7 1377 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 B2RBV5 119 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 HNRNPCL1O60812 293 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 TBCAO75347 108 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 KRT4P19013 534 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 IVDP26440 423 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 RASSF3Q86WH2 238 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 LRRC6Q86X45 466 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 HAPLN3Q96S86 360 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 TRIM55Q9BYV6 548 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 ZNF287Q9HBT7 754 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 ADAMTSL1Q8N6G6 1762 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 DLEC1Q9Y238 1755 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 ATP8B3O60423 1300 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 TCP10L2B9ZVM9 353 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 ASLP04424 464 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 MUTP22033 750 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 PSMC2P35998 433 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 CDC16Q13042 620 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 NR1H3Q13133 447 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 Q4G0T1 1027 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 ZNF653Q96CK0 615 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 CLMNQ96JQ2 1002 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 MIS12Q9H081 205 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 KANSL3Q9P2N6 904 aa15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 R3HDM2Q9Y2K5 976 aaKnown RBP15.53■□□□□ 0.08
NCKIPSD-204ENST00000416649 YDJCA8MPS7 323 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 TMCC1O94876 653 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 ENO1P06733 434 aaKnown RBP15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 DPEP1P16444 411 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 YY1P25490 414 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 SLC12A3P55017 1021 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 MYL7Q01449 175 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 SH2D4BQ5SQS7 431 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 C6orf163Q5TEZ5 329 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 NEDD1Q8NHV4 660 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 NCSTNQ92542 709 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 PTCD3Q96EY7 689 aaKnown RBP15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 IWS1Q96ST2 819 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 SYT11Q9BT88 431 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 THTPAQ9BU02 230 aa15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.52■□□□□ 0.08
NCKIPSD-204ENST00000416649 SNED1Q8TER0 1413 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 TCEA3O75764 348 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 NMT1P30419 496 aaKnown RBP15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 KDSRQ06136 332 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 MTM1Q13496 603 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 TTLL12Q14166 644 aaPredicted RBP15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 FASTKD3Q14CZ7 662 aaKnown RBP15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 R3HDM1Q15032 1099 aaKnown RBP15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 C1orf146Q5VVC0 180 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 PCNX4Q63HM2 1172 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 CCDC174Q6PII3 467 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 PODNQ7Z5L7 613 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 FBXO27Q8NI29 283 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 HAUS1Q96CS2 278 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 FAM163AQ96GL9 167 aaPredicted RBP15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 PRMT6Q96LA8 375 aaPredicted RBP15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 DNM3Q9UQ16 869 aa15.52■□□□□ 0.07
NCKIPSD-204ENST00000416649 CIB2O75838 187 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 MTMR2Q13614 643 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 DACT2Q5SW24 774 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 RIPOR1Q6ZS17 1223 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 ARHGAP24Q8N264 748 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 LARGE2Q8N3Y3 721 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 CEP70Q8NHQ1 597 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 HERPUD2Q9BSE4 406 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 PLVAPQ9BX97 442 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 TMEM120AQ9BXJ8 343 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 MAK16Q9BXY0 300 aaKnown RBP15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 BHMT2Q9H2M3 363 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 PPM1HQ9ULR3 514 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 SMG5Q9UPR3 1016 aaKnown RBP15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 ZNF510Q9Y2H8 683 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 KIAA1551Q9HCM1 1747 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 MYO3BQ8WXR4 1341 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 COL11A2P13942 1736 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 DPY19L2Q6NUT2 758 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 RAPH1Q70E73 1250 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 CFAP57Q96MR6 1250 aa15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.51■□□□□ 0.07
NCKIPSD-204ENST00000416649 SUPT3HO75486 399 aa15.5■□□□□ 0.07
NCKIPSD-204ENST00000416649 GRIA2P42262 883 aa15.5■□□□□ 0.07
NCKIPSD-204ENST00000416649 AP2B1P63010 937 aa15.5■□□□□ 0.07
NCKIPSD-204ENST00000416649 MED21Q13503 144 aa15.5■□□□□ 0.07
NCKIPSD-204ENST00000416649 PTK6Q13882 451 aa15.5■□□□□ 0.07
NCKIPSD-204ENST00000416649 CATSPER3Q86XQ3 398 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms