RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CALCAP01258 141 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 CD4P01730 458 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 CKBP12277 381 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 P4HA1P13674 534 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 AKAP5P24588 427 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 LRPAP1P30533 357 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 RAB27AP51159 221 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 NOMO3P69849 1222 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 GPC5P78333 572 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 WHAMMP3Q1A5X7 153 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 WDR72Q3MJ13 1102 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 C9orf57Q5W0N0 161 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 TWF2Q6IBS0 349 aaKnown RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 FAM43BQ6ZT52 329 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF606Q8WXB4 792 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PPP1R10Q96QC0 940 aaKnown RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ZSWIM1Q9BR11 485 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 TLR10Q9BXR5 811 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 SMYD3Q9H7B4 428 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 STARD7Q9NQZ5 370 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 GTF3C4Q9UKN8 822 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PADI3Q9ULW8 664 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 STXBP5LQ9Y2K9 1186 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PTPRDP23468 1912 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 CENPFP49454 3210 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 FNDC1Q4ZHG4 1894 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 NLRC5Q86WI3 1866 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 TMCO5BA8MYB1 307 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ENC1O14682 589 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 INPPL1O15357 1258 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 MGEA5O60502 916 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 LSM8O95777 96 aaKnown RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 MYCNP04198 464 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 HSPA6P17066 643 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 RAD23BP54727 409 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PAK2Q13177 524 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF618Q5T7W0 954 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 MON1BQ7L1V2 547 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF572Q7Z3I7 529 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PHF13Q86YI8 300 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 PLCD3Q8N3E9 789 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 GSTCDQ8NEC7 633 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 SLC35G2Q8TBE7 412 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 C18orf25Q96B23 403 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 VCPIP1Q96JH7 1222 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 AVENQ9NQS1 362 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 SEPT11Q9NVA2 429 aaKnown RBP5.89□□□□□ -1.47
EPHA4-202ENST00000409854 COG5Q9UP83 839 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 GIT1Q9Y2X7 761 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 SAR1BQ9Y6B6 198 aa5.89□□□□□ -1.47
EPHA4-202ENST00000409854 CES2O00748 559 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 PPEF2O14830 753 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 TADA3O75528 432 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 CFHP08603 1231 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 WEE2P0C1S8 567 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 MYBL1P10243 752 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 CD52P31358 61 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 RAP1GAPP47736 663 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 SOX4Q06945 474 aaPredicted RBP5.88□□□□□ -1.47
EPHA4-202ENST00000409854 MYO1EQ12965 1108 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 PTP4A2Q12974 167 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 C11orf63Q6NUN7 778 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 SCARA5Q6ZMJ2 495 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 FAM126BQ8IXS8 530 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 MCOLN2Q8IZK6 566 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 SLC4A11Q8NBS3 891 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 LRRN4CLQ8ND94 238 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 CAGE1Q8TC20 777 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 TRIM11Q96F44 468 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 BEGAINQ9BUH8 593 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF518BQ9C0D4 1074 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 TRPV6Q9H1D0 765 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 OSGEPQ9NPF4 335 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 GDAP2Q9NXN4 497 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 UVRAGQ9P2Y5 699 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 NXF1Q9UBU9 619 aaKnown RBP5.88□□□□□ -1.47
EPHA4-202ENST00000409854 NOD1Q9Y239 953 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 A0A0U1RQF3 1178 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 DYNC1I1O14576 645 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 THAP12O43422 761 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 GHRP10912 638 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 ATF7P17544 494 aaPredicted RBP5.88□□□□□ -1.47
EPHA4-202ENST00000409854 TCP1P17987 556 aaKnown RBP5.88□□□□□ -1.47
EPHA4-202ENST00000409854 CD58P19256 250 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 ABCB4P21439 1286 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 PNPLA4P41247 253 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 TNNC1P63316 161 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 MBTPS1Q14703 1052 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 GLRA4Q5JXX5 417 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 AGMOQ6ZNB7 445 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 HACE1Q8IYU2 909 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 SYCE1Q8N0S2 351 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 CEP112Q8N8E3 955 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 TFAP2BQ92481 460 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 CYFIP2Q96F07 1278 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 ZNF560Q96MR9 790 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 TWNKQ96RR1 684 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 APOL6Q9BWW8 343 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 CARD6Q9BX69 1037 aa5.88□□□□□ -1.47
EPHA4-202ENST00000409854 ELOVL4Q9GZR5 314 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms