RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 QARSP47897 775 aaKnown RBP18.5■□□□□ 0.55
SMPD4-202ENST00000409031 RAP1GDS1P52306 607 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 MARK2Q7KZI7 788 aaKnown RBP18.5■□□□□ 0.55
SMPD4-202ENST00000409031 CATSPER3Q86XQ3 398 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 PLD3Q8IV08 490 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 EXOC8Q8IYI6 725 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 TMCO5AQ8N6Q1 288 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 C7orf31Q8N865 590 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 HSPBP1Q9NZL4 362 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 PALM3A6NDB9 673 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-202ENST00000409031 ZNF839A8K0R7 811 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 S100A5P33763 92 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 NUDT2P50583 147 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 NFX1Q12986 1120 aaKnown RBP18.5■□□□□ 0.55
SMPD4-202ENST00000409031 PCNX4Q63HM2 1172 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 ZNF677Q86XU0 584 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 PBX1P40424 430 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 AQP5P55064 265 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 POU5F1BQ06416 359 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 MYLK4Q86YV6 388 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-202ENST00000409031 GPD1LQ8N335 351 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 ZNF555Q8NEP9 628 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 LXNQ9BS40 222 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 EML4Q9HC35 981 aaKnown RBP18.5■□□□□ 0.55
SMPD4-202ENST00000409031 TBC1D22BQ9NU19 505 aa18.5■□□□□ 0.55
SMPD4-202ENST00000409031 ANGPT2O15123 496 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 CSF1RP07333 972 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 FASTKD1Q53R41 847 aaKnown RBP18.49■□□□□ 0.55
SMPD4-202ENST00000409031 FAM47CQ5HY64 1035 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 FAM160B2Q86V87 743 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 UTP6Q9NYH9 597 aaKnown RBP18.49■□□□□ 0.55
SMPD4-202ENST00000409031 GTPBP10A4D1E9 387 aaKnown RBP18.49■□□□□ 0.55
SMPD4-202ENST00000409031 DRG2P55039 364 aaKnown RBP18.49■□□□□ 0.55
SMPD4-202ENST00000409031 PLOD1Q02809 727 aaPredicted RBP18.49■□□□□ 0.55
SMPD4-202ENST00000409031 CCNG2Q16589 344 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 C1orf228Q6PIY5 440 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 A0A087X0B3 334 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 RCCD1A6NED2 376 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 KCNN4O15554 427 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 PSTPIP1O43586 416 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 MGRN1O60291 552 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 RASSF9O75901 435 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 RBP3P10745 1247 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 TCN1P20061 433 aaPredicted RBP18.49■□□□□ 0.55
SMPD4-202ENST00000409031 RPA1P27694 616 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 ATXN3P54252 364 aaPredicted RBP18.49■□□□□ 0.55
SMPD4-202ENST00000409031 MINPP1Q9UNW1 487 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 INPP5FQ9Y2H2 1132 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 ACTL7BQ9Y614 415 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 FOXN3O00409 490 aaPredicted RBP18.49■□□□□ 0.55
SMPD4-202ENST00000409031 ZNF699Q32M78 642 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 ACAD10Q6JQN1 1059 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 TMEM179Q6ZVK1 233 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 CCDC80Q76M96 950 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 ZBTB33Q86T24 672 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 KLHL23Q8NBE8 558 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 GDPD5Q8WTR4 605 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 LRRC4Q9HBW1 653 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 WDR35Q9P2L0 1181 aa18.49■□□□□ 0.55
SMPD4-202ENST00000409031 FAM196BA6NMK8 535 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 XPOTO43592 962 aaKnown RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 AUHQ13825 339 aaKnown RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 QPCTQ16769 361 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 PAFAH2Q99487 392 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 NDNQ99608 321 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 CCDC28BQ9BUN5 200 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 PARVBQ9HBI1 364 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 ATP5BP06576 529 aaKnown RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 STX5Q13190 355 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 SHCBP1LQ9BZQ2 653 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 PAIP1Q9H074 479 aaKnown RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 CDYLQ9Y232 598 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 APOL1O14791 398 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 ZNF189O75820 626 aaPredicted RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 EFCAB1Q9HAE3 211 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 MROH7Q68CQ1 1323 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 MYO3AQ8NEV4 1616 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 AGPSO00116 658 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 SRP72O76094 671 aaKnown RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 ALDH1B1P30837 517 aa18.48■□□□□ 0.55
SMPD4-202ENST00000409031 ABCE1P61221 599 aaKnown RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 BNC2Q6ZN30 1099 aaPredicted RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 EZH1Q92800 747 aaPredicted RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 REXO2Q9Y3B8 237 aaKnown RBP18.48■□□□□ 0.55
SMPD4-202ENST00000409031 ADGRB2O60241 1585 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 CST8O60676 142 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 GDF11O95390 407 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 ABL1P00519 1130 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 HNRNPH3P31942 346 aaKnown RBP18.47■□□□□ 0.55
SMPD4-202ENST00000409031 MMP13P45452 471 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 EAPPQ56P03 285 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-202ENST00000409031 CLEC4FQ8N1N0 589 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 ZNF398Q8TD17 642 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 ZNF75CPQ92670 426 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-202ENST00000409031 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 DLC1Q96QB1 1528 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 CYP11B2P19099 503 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 TAF12Q16514 161 aa18.47■□□□□ 0.55
SMPD4-202ENST00000409031 PLEKHA7Q6IQ23 1121 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms