RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 LRRC14BA6NHZ5 514 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 RHPN2P1A8MT19 583 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 FOXN3O00409 490 aaPredicted RBP6□□□□□ -1.45
HMGB1P13-201ENST00000406019 TNFSF4P23510 183 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 ALDH1A3P47895 512 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 CLRN1P58418 232 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 CDC42EP1Q00587 391 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 NHLH2Q02577 135 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 ZNF543Q08ER8 600 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 FGL2Q14314 439 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 FAM180AQ6UWF9 173 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 SEM1Q6ZVN7 128 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 LDLRAD3Q86YD5 345 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 MYLK4Q86YV6 388 aaPredicted RBP6□□□□□ -1.45
HMGB1P13-201ENST00000406019 SMAP1Q8IYB5 467 aaPredicted RBP6□□□□□ -1.45
HMGB1P13-201ENST00000406019 CPXCR1Q8N123 301 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 C3orf20Q8ND61 904 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 IL31RAQ8NI17 732 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 TFAP2CQ92754 450 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 FAM167AQ96KS9 214 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 STARD7Q9NQZ5 370 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 SRRDQ9UH36 339 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 AJAP1Q9UKB5 411 aaPredicted RBP6□□□□□ -1.45
HMGB1P13-201ENST00000406019 TPCN1Q9ULQ1 816 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 PADI4Q9UM07 663 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 HDAC5Q9UQL6 1122 aa6□□□□□ -1.45
HMGB1P13-201ENST00000406019 MYO1FO00160 1098 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 KPNA5O15131 536 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 ZNF185O15231 689 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 PHGDHO43175 533 aaKnown RBP5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 WDHD1O75717 1129 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 SNRPA1P09661 255 aaKnown RBP5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 TARDBPQ13148 414 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 AGAP9Q5VTM2 703 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 IZUMO3Q5VZ72 239 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 GDF7Q7Z4P5 450 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 MRI1Q9BV20 369 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 MLST8Q9BVC4 326 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 SPON1Q9HCB6 807 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 ARFGAP3Q9NP61 516 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 FZD1Q9UP38 647 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 ACTL7AQ9Y615 435 aa5.99□□□□□ -1.45
HMGB1P13-201ENST00000406019 TMEM200CA6NKL6 621 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 DRGXA6NNA5 263 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 ISM1B1AKI9 464 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 NPHP1O15259 732 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 NCK2O43639 380 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 SCAF4O95104 1147 aaKnown RBP5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 ARIH2O95376 493 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 TYRP14679 529 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 IL2RBP14784 551 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 MCM7P33993 719 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 PPM1AP35813 382 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 CHN2P52757 468 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 RNASE9P60153 205 aaKnown RBP5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 PLS1Q14651 629 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 BEAN1Q3B7T3 259 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 PDCD4Q53EL6 469 aaKnown RBP5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 EFCAB12Q6NXP0 572 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 RHOT1Q8IXI2 618 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 ULK2Q8IYT8 1036 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 RNF152Q8N8N0 203 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 DCBLD1Q8N8Z6 715 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 STON2Q8WXE9 905 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 BRI3BPQ8WY22 251 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 KIAA1191Q96A73 305 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 CYFIP2Q96F07 1278 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 SLC35A4Q96G79 324 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 CLPTM1LQ96KA5 538 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 DCLRE1CQ96SD1 692 aaKnown RBP5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 MYOCQ99972 504 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 NRDE2Q9H7Z3 1164 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 ARMT1Q9H993 441 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 LMBRD1Q9NUN5 540 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 CALCOCO1Q9P1Z2 691 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 EIF2B4Q9UI10 523 aaKnown RBP5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 PNMA2Q9UL42 364 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 CORO2BQ9UQ03 480 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 LRCH1Q9Y2L9 728 aa5.98□□□□□ -1.45
HMGB1P13-201ENST00000406019 CENPVL1A0A0U1RR11 272 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 CCDC78A2IDD5 438 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 DIRC3C9JPN6 131 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 RPS6KA4O75676 772 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 TSHRP16473 764 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 MAKP20794 623 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 ABCB4P21439 1286 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 MGAT1P26572 445 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 TNFAIP2Q03169 654 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 KHDC1Q4VXA5 237 aaKnown RBP5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 CCDC157Q569K6 752 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 FAM209BQ5JX69 171 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 ATXN7L2Q5T6C5 722 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 HEATR3Q7Z4Q2 680 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 ZFP28Q8NHY6 868 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 IFI44Q8TCB0 444 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 MTFMTQ96DP5 389 aaKnown RBP5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 MYEOVQ96EZ4 313 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 NAP1L4Q99733 375 aaKnown RBP5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 ADAM2Q99965 735 aa5.97□□□□□ -1.45
HMGB1P13-201ENST00000406019 COLEC11Q9BWP8 271 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms