RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 ARHGAP44Q17R89 818 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 HERC6Q8IVU3 1022 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 COLGALT2Q8IYK4 626 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 SHC3Q92529 594 aa23.55■■□□□ 1.36
EPCAM-202ENST00000405271 HNRNPH3P31942 346 aaKnown RBP23.54■■□□□ 1.36
EPCAM-202ENST00000405271 GATMP50440 423 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 SFMBT2Q5VUG0 894 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 KAT5Q92993 513 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 ELMO3Q96BJ8 720 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 GPR88Q9GZN0 384 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 NKX2-4Q9H2Z4 354 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 SLC28A3Q9HAS3 691 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 CYP3A43Q9HB55 503 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 RC3H2Q9HBD1 1191 aaKnown RBP23.54■■□□□ 1.36
EPCAM-202ENST00000405271 GDAP2Q9NXN4 497 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 NXF1Q9UBU9 619 aaKnown RBP23.54■■□□□ 1.36
EPCAM-202ENST00000405271 MYH10P35580 1976 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 KPNA7A9QM74 516 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 TMEM189-UBE2V1I3L0A0 370 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 DDHD2O94830 711 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 SOX5P35711 763 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 LRRC8AQ8IWT6 810 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 TTC39CQ8N584 583 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 CCDC112Q8NEF3 446 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 ZNF689Q96CS4 500 aaPredicted RBP23.54■■□□□ 1.36
EPCAM-202ENST00000405271 ARID3AQ99856 593 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 TMEM175Q9BSA9 504 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 ZNHIT6Q9NWK9 470 aaKnown RBP23.54■■□□□ 1.36
EPCAM-202ENST00000405271 POLIQ9UNA4 740 aa23.54■■□□□ 1.36
EPCAM-202ENST00000405271 NRDCO43847 1150 aa23.53■■□□□ 1.36
EPCAM-202ENST00000405271 CCDC172P0C7W6 258 aa23.53■■□□□ 1.36
EPCAM-202ENST00000405271 FECHP22830 423 aa23.53■■□□□ 1.36
EPCAM-202ENST00000405271 LILRA4P59901 499 aa23.53■■□□□ 1.36
EPCAM-202ENST00000405271 TMCO2Q7Z6W1 182 aaPredicted RBP23.53■■□□□ 1.36
EPCAM-202ENST00000405271 ZNF280BQ86YH2 543 aa23.53■■□□□ 1.36
EPCAM-202ENST00000405271 CMTR2Q8IYT2 770 aaKnown RBP23.53■■□□□ 1.36
EPCAM-202ENST00000405271 UBR7Q8N806 425 aa23.53■■□□□ 1.36
EPCAM-202ENST00000405271 NRDE2Q9H7Z3 1164 aa23.53■■□□□ 1.36
EPCAM-202ENST00000405271 AIPL1Q9NZN9 384 aa23.53■■□□□ 1.36
EPCAM-202ENST00000405271 A0A0C4DFX4 3053 aa23.52■■□□□ 1.36
EPCAM-202ENST00000405271 FERP16591 822 aa23.52■■□□□ 1.36
EPCAM-202ENST00000405271 AARSP49588 968 aaKnown RBP eCLIP23.52■■□□□ 1.36
EPCAM-202ENST00000405271 ASIC2Q16515 512 aa23.52■■□□□ 1.36
EPCAM-202ENST00000405271 MEA1Q16626 185 aa23.52■■□□□ 1.36
EPCAM-202ENST00000405271 SCARA5Q6ZMJ2 495 aa23.52■■□□□ 1.36
EPCAM-202ENST00000405271 CACNG4Q9UBN1 327 aa23.52■■□□□ 1.36
EPCAM-202ENST00000405271 SNX9Q9Y5X1 595 aa23.52■■□□□ 1.36
EPCAM-202ENST00000405271 B4GALT3O60512 393 aa23.51■■□□□ 1.35
EPCAM-202ENST00000405271 DCLRE1AQ6PJP8 1040 aa23.51■■□□□ 1.35
EPCAM-202ENST00000405271 FAM71AQ8IYT1 594 aa23.51■■□□□ 1.35
EPCAM-202ENST00000405271 C3orf58Q8NDZ4 430 aa23.51■■□□□ 1.35
EPCAM-202ENST00000405271 PAAF1Q9BRP4 392 aa23.51■■□□□ 1.35
EPCAM-202ENST00000405271 CNTN6Q9UQ52 1028 aa23.51■■□□□ 1.35
EPCAM-202ENST00000405271 CARNS1A5YM72 827 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 FOXN3O00409 490 aaPredicted RBP23.5■■□□□ 1.35
EPCAM-202ENST00000405271 SPTLC1O15269 473 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 ACO1P21399 889 aaKnown RBP23.5■■□□□ 1.35
EPCAM-202ENST00000405271 CDK17Q00537 523 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 PAN2Q504Q3 1202 aaKnown RBP23.5■■□□□ 1.35
EPCAM-202ENST00000405271 E4F1Q66K89 784 aaPredicted RBP23.5■■□□□ 1.35
EPCAM-202ENST00000405271 DPH6Q7L8W6 267 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 TOP6BLQ8N6T0 577 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 MYLIPQ8WY64 445 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 MMS19Q96T76 1030 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 BAG1Q99933 345 aaPredicted RBP23.5■■□□□ 1.35
EPCAM-202ENST00000405271 SMYD3Q9H7B4 428 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 DNAJB4Q9UDY4 337 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 PRUNE2Q8WUY3 3088 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 PTPRDP23468 1912 aa23.5■■□□□ 1.35
EPCAM-202ENST00000405271 ARHGEF37A1IGU5 675 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 B3GAT3O94766 335 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 GFPT2O94808 682 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 GJB5O95377 273 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 CA3P07451 260 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 PRKCIP41743 596 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 OR1G1P47890 313 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 INCA1Q0VD86 236 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 PPP2R2DQ66LE6 453 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 CISHQ9NSE2 258 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 PLXNA4Q9HCM2 1894 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 TLL1O43897 1013 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 HUS1O60921 280 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 KIF4AO95239 1232 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 SERPING1P05155 500 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 FAM163BP0C2L3 166 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 PNMA6AP0CW24 399 aaPredicted RBP23.49■■□□□ 1.35
EPCAM-202ENST00000405271 KRT5P13647 590 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 HS1BP3Q53T59 392 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 FAM117BQ6P1L5 589 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 WDR59Q6PJI9 974 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 LIMS2Q7Z4I7 341 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 TMEM139Q8IV31 216 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 APPL2Q8NEU8 664 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 TRIM44Q96DX7 344 aaPredicted RBP23.49■■□□□ 1.35
EPCAM-202ENST00000405271 YME1L1Q96TA2 773 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 ZBED2Q9BTP6 218 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 SDCBP2Q9H190 292 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 PCDHB4Q9Y5E5 795 aa23.49■■□□□ 1.35
EPCAM-202ENST00000405271 BZW2Q9Y6E2 419 aaKnown RBP23.49■■□□□ 1.35
EPCAM-202ENST00000405271 TACC1O75410 805 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms