RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TPH2Q8IWU9 490 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 BICD1Q96G01 975 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 BTBD10Q9BSF8 475 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 ETNK2Q9NVF9 386 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 WHRNQ9P202 907 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 CHMP2BQ9UQN3 213 aa18.05■□□□□ 0.48
PTPRA-205ENST00000399903 GSC2O15499 205 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 CYP26A1O43174 497 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 BCRP11274 1271 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 FASTKD3Q14CZ7 662 aaKnown RBP18.04■□□□□ 0.48
PTPRA-205ENST00000399903 PLEKHG4Q58EX7 1191 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 PRAMEF18Q5VWM3 479 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 RSBN1LQ6PCB5 846 aaPredicted RBP18.04■□□□□ 0.48
PTPRA-205ENST00000399903 RINLQ6ZS11 566 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 CPXCR1Q8N123 301 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 SNRNP27Q8WVK2 155 aaKnown RBP18.04■□□□□ 0.48
PTPRA-205ENST00000399903 ZNF75CPQ92670 426 aaPredicted RBP18.04■□□□□ 0.48
PTPRA-205ENST00000399903 DNAJC1Q96KC8 554 aaKnown RBP18.04■□□□□ 0.48
PTPRA-205ENST00000399903 CAMKK2Q96RR4 588 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 DMAP1Q9NPF5 467 aaPredicted RBP18.04■□□□□ 0.48
PTPRA-205ENST00000399903 EML1O00423 815 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 BANF1O75531 89 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 EYA4O95677 639 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 KRT4P19013 534 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 ARHGEF19Q8IW93 802 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 HIC2Q96JB3 615 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 TRAIPQ9BWF2 469 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 KIAA1586Q9HCI6 787 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 ANAPC7Q9UJX3 599 aa18.04■□□□□ 0.48
PTPRA-205ENST00000399903 STK10O94804 968 aaKnown RBP18.03■□□□□ 0.48
PTPRA-205ENST00000399903 ALAS1P13196 640 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 TPP2P29144 1249 aaPredicted RBP18.03■□□□□ 0.48
PTPRA-205ENST00000399903 USP46P62068 366 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 NOP14P78316 857 aaKnown RBP18.03■□□□□ 0.48
PTPRA-205ENST00000399903 KDSRQ06136 332 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 P3H1Q32P28 736 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 LLGL2Q6P1M3 1020 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 LRRC6Q86X45 466 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 PCDHB18PQ96TA0 734 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 SYNCQ9H7C4 482 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 CLIC5Q9NZA1 410 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 LNPEPQ9UIQ6 1025 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 H3BRJ5 948 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 TGFB1I1O43294 461 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 IFNB1P01574 187 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 FGFR1P11362 822 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 MAPK6Q16659 721 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 ERMNQ8TAM6 284 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 SH3TC2Q8TF17 1288 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 MAML1Q92585 1016 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 HAUS1Q96CS2 278 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 PLVAPQ9BX97 442 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 PDP2Q9P2J9 529 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 ASTN2O75129 1339 aaPredicted RBP18.03■□□□□ 0.48
PTPRA-205ENST00000399903 ADGRA3Q8IWK6 1321 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 MSH4O15457 936 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 CYP1A1P04798 512 aaPredicted RBP18.03■□□□□ 0.48
PTPRA-205ENST00000399903 ENO1P06733 434 aaKnown RBP18.03■□□□□ 0.48
PTPRA-205ENST00000399903 ZSCAN5DPP0CG00 497 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 SSTR3P32745 418 aaPredicted RBP18.03■□□□□ 0.48
PTPRA-205ENST00000399903 STAT2P52630 851 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 DLG4P78352 724 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 STAT4Q14765 748 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 JDP2Q8WYK2 163 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 HERPUD2Q9BSE4 406 aa18.03■□□□□ 0.48
PTPRA-205ENST00000399903 TP73O15350 636 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 ARFIP2P53365 341 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 WDR72Q3MJ13 1102 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 PPP1R18Q6NYC8 613 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 TRABD2AQ86V40 505 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 RIBC1Q8N443 379 aaPredicted RBP18.02■□□□□ 0.48
PTPRA-205ENST00000399903 OLIG1Q8TAK6 271 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 NSL1Q96IY1 281 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 FNBP1Q96RU3 617 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 GPR88Q9GZN0 384 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 DNAAF2Q9NVR5 837 aaKnown RBP18.02■□□□□ 0.48
PTPRA-205ENST00000399903 TISP43B9A030 160 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 GGPS1O95749 300 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 SIX1Q15475 284 aaPredicted RBP18.02■□□□□ 0.48
PTPRA-205ENST00000399903 PCNX4Q63HM2 1172 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 C11orf63Q6NUN7 778 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 SLC47A2Q86VL8 602 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 APLFQ8IW19 511 aaPredicted RBP18.02■□□□□ 0.48
PTPRA-205ENST00000399903 ZBED8Q8IZ13 594 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 CENPKQ9BS16 269 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 ZBTB21Q9ULJ3 1066 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 RABGAP1Q9Y3P9 1069 aa18.02■□□□□ 0.48
PTPRA-205ENST00000399903 EMSYQ7Z589 1322 aa18.02■□□□□ 0.47
PTPRA-205ENST00000399903 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
PTPRA-205ENST00000399903 B2RBV5 119 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 MAPK4P31152 587 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 PLCB3Q01970 1234 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 PTPRN2Q92932 1015 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 TTC17Q96AE7 1141 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 LENG9Q96B70 501 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 KRT82Q9NSB4 513 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 ORC2Q13416 577 aaPredicted RBP18.01■□□□□ 0.47
PTPRA-205ENST00000399903 PDK4Q16654 411 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 FOXR2Q6PJQ5 311 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 THTPAQ9BU02 230 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms