RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 GRAPQ13588 217 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 GRAPLQ8TC17 118 aaPredicted RBP20.41■□□□□ 0.86
KDM2A-202ENST00000398645 USP13Q92995 863 aaPredicted RBP20.41■□□□□ 0.86
KDM2A-202ENST00000398645 OSBPL5Q9H0X9 879 aaPredicted RBP20.41■□□□□ 0.86
KDM2A-202ENST00000398645 FAM47DPA6NHR8 397 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 PDGFRAP16234 1089 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 CHRM3P20309 590 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 ABCD1P33897 745 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 FXR1P51114 621 aaKnown RBP eCLIP20.41■□□□□ 0.86
KDM2A-202ENST00000398645 NCALDP61601 193 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 CSNK2BP67870 215 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 SPP2Q13103 211 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 DONSONQ9NYP3 566 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 RASSF9O75901 435 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 FEN1P39748 380 aaKnown RBP20.41■□□□□ 0.86
KDM2A-202ENST00000398645 CCZ1BP86790 482 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 CCZ1P86791 482 aaPredicted RBP20.41■□□□□ 0.86
KDM2A-202ENST00000398645 CDK17Q00537 523 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 SEMA4DQ92854 862 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 FAM111AQ96PZ2 611 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 KCTD10Q9H3F6 313 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 NSMCE4AQ9NXX6 385 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 MAGI2Q86UL8 1455 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 TAF5Q15542 800 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 NFIL3Q16649 462 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 BARGINQ6ZT62 677 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 ZSWIM2Q8NEG5 633 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 PIGBQ92521 554 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 NOD2Q9HC29 1040 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 AGTP01019 485 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 HIST1H2AGP0C0S8 130 aaPredicted RBP20.41■□□□□ 0.86
KDM2A-202ENST00000398645 HIST1H2ADP20671 130 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 PTRHD1Q6GMV3 140 aaKnown RBP20.41■□□□□ 0.86
KDM2A-202ENST00000398645 SRBD1Q8N5C6 995 aaKnown RBP20.41■□□□□ 0.86
KDM2A-202ENST00000398645 HIST1H2AHQ96KK5 128 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 HIST1H2AJQ99878 128 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 H2AFJQ9BTM1 129 aa20.41■□□□□ 0.86
KDM2A-202ENST00000398645 C3orf70A6NLC5 250 aaPredicted RBP20.4■□□□□ 0.86
KDM2A-202ENST00000398645 P4HBP07237 508 aaKnown RBP20.4■□□□□ 0.86
KDM2A-202ENST00000398645 PLEKP08567 350 aaPredicted RBP20.4■□□□□ 0.86
KDM2A-202ENST00000398645 RALAP11233 206 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 AP3B2Q13367 1082 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 SCARA3Q6AZY7 606 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 HAUS6Q7Z4H7 955 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 PRKCBP05771 671 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 CYP2C19P33261 490 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 KCNK10P57789 538 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 DALRD3Q5D0E6 543 aaKnown RBP20.4■□□□□ 0.86
KDM2A-202ENST00000398645 LRRC34Q8IZ02 419 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 RCOR2Q8IZ40 523 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 RPAP3Q9H6T3 665 aaPredicted RBP20.4■□□□□ 0.86
KDM2A-202ENST00000398645 GID8Q9NWU2 228 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 BARHL2Q9NY43 387 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 RSPH10B2B2RC85 870 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 KIF1CO43896 1103 aaKnown RBP20.4■□□□□ 0.86
KDM2A-202ENST00000398645 RSPH10BP0C881 870 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 COMTP21964 271 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 MAGEA4P43358 317 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 GOLGA7BQ2TAP0 167 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 ZC3H15Q8WU90 426 aaKnown RBP20.4■□□□□ 0.86
KDM2A-202ENST00000398645 GRAMD1AQ96CP6 724 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 SCN3BQ9NY72 215 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 PGK2P07205 417 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 GPBP1L1Q9HC44 474 aaPredicted RBP20.4■□□□□ 0.86
KDM2A-202ENST00000398645 YAF2Q8IY57 180 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 NLGN1Q8N2Q7 840 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 MCPH1Q8NEM0 835 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 ATG4AQ8WYN0 398 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 THUMPD3Q9BV44 507 aaKnown RBP20.4■□□□□ 0.86
KDM2A-202ENST00000398645 ARHGEF3Q9NR81 526 aa20.4■□□□□ 0.86
KDM2A-202ENST00000398645 ZNF197O14709 1029 aa20.39■□□□□ 0.86
KDM2A-202ENST00000398645 IL6STP40189 918 aaPredicted RBP20.39■□□□□ 0.86
KDM2A-202ENST00000398645 ATP12AP54707 1039 aa20.39■□□□□ 0.86
KDM2A-202ENST00000398645 NOA1Q8NC60 698 aaKnown RBP20.39■□□□□ 0.86
KDM2A-202ENST00000398645 REEP2Q9BRK0 252 aa20.39■□□□□ 0.86
KDM2A-202ENST00000398645 MT-CO1P00395 513 aa20.39■□□□□ 0.86
KDM2A-202ENST00000398645 ZNF23P17027 643 aa20.39■□□□□ 0.86
KDM2A-202ENST00000398645 ARL4DP49703 201 aa20.39■□□□□ 0.86
KDM2A-202ENST00000398645 ARHGEF26Q96DR7 871 aa20.39■□□□□ 0.86
KDM2A-202ENST00000398645 CCDC134Q9H6E4 229 aa20.39■□□□□ 0.85
KDM2A-202ENST00000398645 ZDHHC9Q9Y397 364 aa20.39■□□□□ 0.85
KDM2A-202ENST00000398645 CPSF4O95639 269 aaKnown RBP20.39■□□□□ 0.85
KDM2A-202ENST00000398645 CYLC2Q14093 348 aaPredicted RBP20.39■□□□□ 0.85
KDM2A-202ENST00000398645 SLC29A2Q14542 456 aa20.39■□□□□ 0.85
KDM2A-202ENST00000398645 C16orf96A6NNT2 1141 aa20.39■□□□□ 0.85
KDM2A-202ENST00000398645 MLNP12872 115 aa20.39■□□□□ 0.85
KDM2A-202ENST00000398645 GRM4Q14833 912 aa20.39■□□□□ 0.85
KDM2A-202ENST00000398645 CENPPQ6IPU0 288 aa20.39■□□□□ 0.85
KDM2A-202ENST00000398645 P3H2Q8IVL5 708 aa20.39■□□□□ 0.85
KDM2A-202ENST00000398645 NSL1Q96IY1 281 aa20.39■□□□□ 0.85
KDM2A-202ENST00000398645 ABCE1P61221 599 aaKnown RBP20.38■□□□□ 0.85
KDM2A-202ENST00000398645 DUOXA2Q1HG44 320 aa20.38■□□□□ 0.85
KDM2A-202ENST00000398645 DCAF6Q58WW2 860 aa20.38■□□□□ 0.85
KDM2A-202ENST00000398645 PRAMEF18Q5VWM3 479 aa20.38■□□□□ 0.85
KDM2A-202ENST00000398645 SPATA18Q8TC71 538 aa20.38■□□□□ 0.85
KDM2A-202ENST00000398645 C18orf8Q96DM3 657 aa20.38■□□□□ 0.85
KDM2A-202ENST00000398645 GCC2Q8IWJ2 1684 aa20.38■□□□□ 0.85
KDM2A-202ENST00000398645 PDE5AO76074 875 aa20.38■□□□□ 0.85
KDM2A-202ENST00000398645 RHOBTB1O94844 696 aa20.38■□□□□ 0.85
KDM2A-202ENST00000398645 CHI3L1P36222 383 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms