RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TSPAN1O60635 241 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 WEE2P0C1S8 567 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 MMP8P22894 467 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 MAN1A1P33908 653 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 MAMLD1Q13495 774 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 ZNF394Q53GI3 561 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 MARCH8Q5T0T0 291 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 C1orf127Q8N9H9 656 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 C12orf50Q8NA57 414 aaPredicted RBP15.9■□□□□ 0.14
CBX3-202ENST00000396386 C1orf131Q8NDD1 294 aaKnown RBP15.9■□□□□ 0.14
CBX3-202ENST00000396386 ADPGKQ9BRR6 497 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 ERP44Q9BS26 406 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 BCO2Q9BYV7 579 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 ZNF518BQ9C0D4 1074 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 NXF1Q9UBU9 619 aaKnown RBP15.9■□□□□ 0.14
CBX3-202ENST00000396386 PCYOX1Q9UHG3 505 aa15.9■□□□□ 0.14
CBX3-202ENST00000396386 RRN3P2A6NIE6 340 aa15.89■□□□□ 0.13
CBX3-202ENST00000396386 FNTAP49354 379 aa15.89■□□□□ 0.13
CBX3-202ENST00000396386 IRF5Q13568 498 aa15.89■□□□□ 0.13
CBX3-202ENST00000396386 MTMR3Q13615 1198 aa15.89■□□□□ 0.13
CBX3-202ENST00000396386 DUPD1Q68J44 220 aa15.89■□□□□ 0.13
CBX3-202ENST00000396386 FEZF2Q8TBJ5 459 aa15.89■□□□□ 0.13
CBX3-202ENST00000396386 MAIP1Q8WWC4 291 aa15.89■□□□□ 0.13
CBX3-202ENST00000396386 CPA4Q9UI42 421 aa15.89■□□□□ 0.13
CBX3-202ENST00000396386 LCMT1Q9UIC8 334 aa15.89■□□□□ 0.13
CBX3-202ENST00000396386 GOLGA6CA6NDK9 693 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 MEFVO15553 781 aaPredicted RBP15.88■□□□□ 0.13
CBX3-202ENST00000396386 ADCY6O43306 1168 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 ITGB3P05106 788 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 GOLGA6DP0CG33 693 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 ATICP31939 592 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 GBP1P32455 592 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 CDH5P33151 784 aaPredicted RBP15.88■□□□□ 0.13
CBX3-202ENST00000396386 PTGIRP43119 386 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 LACTBP83111 547 aaPredicted RBP15.88■□□□□ 0.13
CBX3-202ENST00000396386 MAP2K5Q13163 448 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 TMEM132DQ14C87 1099 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 SIX1Q15475 284 aaPredicted RBP15.88■□□□□ 0.13
CBX3-202ENST00000396386 MORN1Q5T089 497 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 CCDC137Q6PK04 289 aaKnown RBP15.88■□□□□ 0.13
CBX3-202ENST00000396386 RHOT1Q8IXI2 618 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 IQCKQ8N0W5 287 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 TRIM31Q9BZY9 425 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 GOLGA6AQ9NYA3 693 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 IP6K2Q9UHH9 426 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 TCRBV7S2A1N4TA0A589 114 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 KIF3CO14782 793 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 FSCN2O14926 492 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
CBX3-202ENST00000396386 MED7O43513 233 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 RARAP10276 462 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 RAP1GAPP47736 663 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 LMAN1P49257 510 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 DCAF4L1Q3SXM0 396 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 DNAJC24Q6P3W2 148 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 TTC27Q6P3X3 843 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 APBB1IPQ7Z5R6 666 aaPredicted RBP15.88■□□□□ 0.13
CBX3-202ENST00000396386 CD302Q8IX05 232 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 KIAA0319LQ8IZA0 1049 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 ZDHHC14Q8IZN3 488 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 FAM76AQ8TAV0 307 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 PIK3R5Q8WYR1 880 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 DDX27Q96GQ7 796 aaKnown RBP15.88■□□□□ 0.13
CBX3-202ENST00000396386 FMO2Q99518 471 aa15.88■□□□□ 0.13
CBX3-202ENST00000396386 PODXLO00592 558 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 F2P00734 622 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 PAEPP09466 180 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 P4HA1P13674 534 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 EIF4BP23588 611 aaKnown RBP15.87■□□□□ 0.13
CBX3-202ENST00000396386 COILP38432 576 aaPredicted RBP15.87■□□□□ 0.13
CBX3-202ENST00000396386 HUNKP57058 714 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 TAP1Q03518 808 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 SLC10A6Q3KNW5 377 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 WDR72Q3MJ13 1102 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 LRIG3Q6UXM1 1119 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 RASAL3Q86YV0 1011 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 TFAP2BQ92481 460 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 VRTNQ9H8Y1 702 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 ITGA11Q9UKX5 1188 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 C2CD2Q9Y426 696 aa15.87■□□□□ 0.13
CBX3-202ENST00000396386 PDCD11Q14690 1871 aaKnown RBP15.87■□□□□ 0.13
CBX3-202ENST00000396386 A0A1B0GUA9 196 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 CD19P15391 556 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 HSD17B3P37058 310 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 GRM5P41594 1212 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 DRG2P55039 364 aaKnown RBP15.86■□□□□ 0.13
CBX3-202ENST00000396386 SGO2Q562F6 1265 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 TMC3Q7Z5M5 1100 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 NT5DC4Q86YG4 428 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 CCDC105Q8IYK2 499 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 KATNAL2Q8IYT4 538 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 CXorf38Q8TB03 319 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 ACAP3Q96P50 834 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 LRRC19Q9H756 370 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 SMYD3Q9H7B4 428 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 CYP3A43Q9HB55 503 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 SETD4Q9NVD3 440 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 PARP2Q9UGN5 583 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 PLAAQ9Y263 795 aa15.86■□□□□ 0.13
CBX3-202ENST00000396386 PASKQ96RG2 1323 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms