RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 SNX25Q9H3E2 840 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 GDAP2Q9NXN4 497 aa16.47■□□□□ 0.23
VAMP1-202ENST00000396308 PUF60Q9UHX1 559 aaKnown RBP16.47■□□□□ 0.23
VAMP1-202ENST00000396308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-202ENST00000396308 MED7O43513 233 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-202ENST00000396308 WEE2P0C1S8 567 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 ODC1P11926 461 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 GNA15P30679 374 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 CLCNKBP51801 687 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 SLC18A3Q16572 532 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 C10orf76Q5T2E6 689 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 PPP1R2P3Q6NXS1 205 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 PSRC1Q6PGN9 363 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-202ENST00000396308 DSTYKQ6XUX3 929 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 DPH6Q7L8W6 267 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 TOP6BLQ8N6T0 577 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 AGPAT1Q99943 283 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 LBHD1Q9BQE6 289 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-202ENST00000396308 MTIF3Q9H2K0 278 aaKnown RBP16.46■□□□□ 0.23
VAMP1-202ENST00000396308 TBC1D13Q9NVG8 400 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 CNTN6Q9UQ52 1028 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 CEP83Q9Y592 693 aa16.46■□□□□ 0.23
VAMP1-202ENST00000396308 TSC2P49815 1807 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 CARNS1A5YM72 827 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 TBKBP1A7MCY6 615 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 PPEF2O14830 753 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 THAP12O43422 761 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 PAEPP09466 180 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 CYP11B1P15538 503 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 ACO1P21399 889 aaKnown RBP16.45■□□□□ 0.22
VAMP1-202ENST00000396308 RAP1GAPP47736 663 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 LILRA4P59901 499 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 INCA1Q0VD86 236 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 MTF1Q14872 753 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 NAB2Q15742 525 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 UPP1Q16831 310 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 TRIM72Q6ZMU5 477 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 TOGARAM2Q6ZUX3 1019 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 METTL23Q86XA0 190 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 TMEM86AQ8N2M4 240 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 EPS8L1Q8TE68 723 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 DESI2Q9BSY9 194 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 TSGA10Q9BZW7 698 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 MIOSQ9NXC5 875 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 DSEQ9UL01 958 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 BARX2Q9UMQ3 279 aaPredicted RBP16.45■□□□□ 0.22
VAMP1-202ENST00000396308 PPP2R2CQ9Y2T4 447 aa16.45■□□□□ 0.22
VAMP1-202ENST00000396308 CYB561D2O14569 222 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 TRAPPC3O43617 180 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 TACC1O75410 805 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 B3GAT3O94766 335 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 UPP2O95045 317 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 FAM163BP0C2L3 166 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 CD19P15391 556 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 CLCN1P35523 988 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 OR1G1P47890 313 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 CDR2Q01850 454 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 ARHGAP29Q52LW3 1261 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 DCLRE1AQ6PJP8 1040 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 ZNF571Q7Z3V5 609 aaPredicted RBP16.44■□□□□ 0.22
VAMP1-202ENST00000396308 SLC47A2Q86VL8 602 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 UNC93AQ86WB7 457 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 ADGRF2Q8IZF7 708 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 UBR7Q8N806 425 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 OR6B3Q8NGW1 331 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 NT5C1AQ9BXI3 368 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 SPTLC3Q9NUV7 552 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 ADAMTS1Q9UHI8 967 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 KIAA1257Q9ULG3 409 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 ADGRG1Q9Y653 693 aa16.44■□□□□ 0.22
VAMP1-202ENST00000396308 ZBBXA8MT70 800 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 RBAK-RBAKDNI3L0D1 243 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 CILPO75339 1184 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 FGBP02675 491 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 AFF1P51825 1210 aaKnown RBP16.43■□□□□ 0.22
VAMP1-202ENST00000396308 ZNF132P52740 706 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 GFPT1Q06210 699 aaPredicted RBP16.43■□□□□ 0.22
VAMP1-202ENST00000396308 DSC1Q08554 894 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 STILQ15468 1287 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 TCTN1Q2MV58 587 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 ZNF394Q53GI3 561 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 TAF3Q5VWG9 929 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 NOP9Q86U38 636 aaKnown RBP16.43■□□□□ 0.22
VAMP1-202ENST00000396308 GLYCTKQ8IVS8 523 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 CCAR2Q8N163 923 aaKnown RBP16.43■□□□□ 0.22
VAMP1-202ENST00000396308 ACRBPQ8NEB7 543 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 SPATA18Q8TC71 538 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 BADQ92934 168 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 TMEM176AQ96HP8 235 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 TNIP3Q96KP6 325 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 CASD1Q96PB1 797 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 TMEM175Q9BSA9 504 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 COLEC11Q9BWP8 271 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 NOCTQ9UK39 431 aaKnown RBP16.43■□□□□ 0.22
VAMP1-202ENST00000396308 ATP8B3O60423 1300 aa16.43■□□□□ 0.22
VAMP1-202ENST00000396308 A8MXQ7 604 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 TMEM189-UBE2V1I3L0A0 370 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 KRT86O43790 486 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms