RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 IGBP1P78318 339 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 PTPN11Q06124 597 aaPredicted RBP15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 MFSD10Q14728 455 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 MARCH8Q5T0T0 291 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 NT5DC4Q86YG4 428 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 UBL4BQ8N7F7 174 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 ANKRD36BP1Q96IX9 119 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 ARID3AQ99856 593 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 LRRC1Q9BTT6 524 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 UBXN6Q9BZV1 441 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 UBE2OQ9C0C9 1292 aaKnown RBP15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 NIF3L1Q9GZT8 377 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 WNT8AQ9H1J5 351 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 AKT3Q9Y243 479 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 ALG6Q9Y672 507 aa15.39■□□□□ 0.05
RTFDC1-203ENST00000395881 NRCAMQ92823 1304 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 A0A087WZ62 844 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 B4GALT5O43286 388 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 CEP104O60308 925 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 IQCF3P0C7M6 154 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 TMEM191BP0C7N4 346 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 CYP2C9P11712 490 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 TRPC3Q13507 836 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 TMEM132AQ24JP5 1023 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 EEF1DP3Q658K8 133 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 GDF6Q6KF10 455 aaPredicted RBP15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 SESTD1Q86VW0 696 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 ZNF653Q96CK0 615 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 FDXACB1Q9BRP7 624 aaPredicted RBP15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 PPP1R12CQ9BZL4 782 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 MTMR12Q9C0I1 747 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 GOLPH3Q9H4A6 298 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 ACP6Q9NPH0 428 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.38■□□□□ 0.052e-6■■■■■ 89.4
RTFDC1-203ENST00000395881 PCDHB4Q9Y5E5 795 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 UMODL1Q5DID0 1318 aa15.38■□□□□ 0.05
RTFDC1-203ENST00000395881 TULP1O00294 542 aaPredicted RBP15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 SASH3O75995 380 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 CYP2C18P33260 490 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 EPHB4P54760 987 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 HIC1Q14526 733 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 SEZ6Q53EL9 994 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 SPOPLQ6IQ16 392 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 PHF13Q86YI8 300 aaPredicted RBP15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 CD302Q8IX05 232 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 IFT20Q8IY31 132 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 KIAA0319LQ8IZA0 1049 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 MCOLN2Q8IZK6 566 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 RBBP8NLQ8NC74 664 aaPredicted RBP15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 ZNF564Q8TBZ8 553 aaPredicted RBP15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 KATNAL1Q9BW62 490 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 ACBD3Q9H3P7 528 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 PDZD7Q9H5P4 517 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 SLITRK6Q9H5Y7 841 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 VRTNQ9H8Y1 702 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 EHD2Q9NZN4 543 aa15.37■□□□□ 0.05
RTFDC1-203ENST00000395881 A0A1B0GUA9 196 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 CCDC66A2RUB6 948 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 MBLAC1A4D2B0 266 aaPredicted RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 LSM8O95777 96 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 CST3P01034 146 aaPredicted RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 CTNNA2P26232 953 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 GNA15P30679 374 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 ATICP31939 592 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 NSFP46459 744 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 PLA2G4AP47712 749 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 MYL6P60660 151 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 GPS2Q13227 327 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 MFSD5Q6N075 450 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 TMEM270Q6UE05 265 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 EFCAB13Q8IY85 973 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 THNSL1Q8IYQ7 743 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 C7orf31Q8N865 590 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 CD101Q93033 1021 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 NUP85Q9BW27 656 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 XYLT2Q9H1B5 865 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 HIPK3Q9H422 1215 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 GDF3Q9NR23 364 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 SMARCAL1Q9NZC9 954 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 CNOT8Q9UFF9 292 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 GTF2IRD1Q9UHL9 959 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 DMGDHQ9UI17 866 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 LCMT1Q9UIC8 334 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 NOC2LQ9Y3T9 749 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 SCN5AQ14524 2016 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 SMIM35A0A1B0GVV1 85 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 A0A1W2PPC1 479 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 STAG3L1P0CL83 205 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 ARF4P18085 180 aaPredicted RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 DNA2P51530 1060 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 ZNF200P98182 395 aaPredicted RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 TFAMQ00059 246 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 C1QBPQ07021 282 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 CASP8Q14790 479 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 ZNF699Q32M78 642 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 DCAF4L1Q3SXM0 396 aa15.36■□□□□ 0.05
RTFDC1-203ENST00000395881 EMBQ6PCB8 327 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms