RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TRIM55Q9BYV6 548 aa13.96□□□□□ -0.18
NFKB1-202ENST00000394820 PICK1Q9NRD5 415 aa13.96□□□□□ -0.18
NFKB1-202ENST00000394820 SEPT10Q9P0V9 454 aa13.96□□□□□ -0.18
NFKB1-202ENST00000394820 H0YGN5 161 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 BTKQ06187 659 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 C1orf146Q5VVC0 180 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 PCNX4Q63HM2 1172 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 BTNL9Q6UXG8 535 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 NLRP9Q7RTR0 991 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 DCLK2Q8N568 766 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 CCHCR1Q8TD31 782 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 FAM111AQ96PZ2 611 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 SMYD2Q9NRG4 433 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 NINJ2Q9NZG7 142 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 NFS1Q9Y697 457 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 A0A1W2PPM1 405 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 SKIP12755 728 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 IL31Q6EBC2 164 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 DARS2Q6PI48 645 aaKnown RBP13.95□□□□□ -0.18
NFKB1-202ENST00000394820 CENPUQ71F23 418 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 RAB3IL1Q8TBN0 382 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 SYTL5Q8TDW5 730 aaPredicted RBP13.95□□□□□ -0.18
NFKB1-202ENST00000394820 P3H4Q92791 437 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 TMEM143Q96AN5 459 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 MCEEQ96PE7 176 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 TRAIPQ9BWF2 469 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 SIX2Q9NPC8 291 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 OLFML3Q9NRN5 406 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 MAST2Q6P0Q8 1798 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 DLEC1Q9Y238 1755 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 WEE2P0C1S8 567 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 ADRA1DP25100 572 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 TNFRSF8P28908 595 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 GNA15P30679 374 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 RPA3P35244 121 aaPredicted RBP13.95□□□□□ -0.18
NFKB1-202ENST00000394820 PGM1P36871 562 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 POLGP54098 1239 aaPredicted RBP13.95□□□□□ -0.18
NFKB1-202ENST00000394820 FASTKD3Q14CZ7 662 aaKnown RBP13.95□□□□□ -0.18
NFKB1-202ENST00000394820 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 CRYGNQ8WXF5 182 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.95□□□□□ -0.18
NFKB1-202ENST00000394820 RANBP17Q9H2T7 1088 aaKnown RBP13.95□□□□□ -0.18
NFKB1-202ENST00000394820 TMEM206Q9H813 350 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 RIPK3Q9Y572 518 aa13.95□□□□□ -0.18
NFKB1-202ENST00000394820 B2RBV5 119 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 DDX3YO15523 660 aaKnown RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 MAP3K7O43318 606 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 CYP3A4P08684 503 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 KCNA3P22001 575 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 HMGB2P26583 209 aaKnown RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 ECHS1P30084 290 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 RARRES1P49788 294 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 SLC30A9Q6PML9 568 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 MCF2L2Q86YR7 1114 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 CCDC125Q86Z20 511 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 MICALL2Q8IY33 904 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 DAW1Q8N136 415 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 SLC26A7Q8TE54 656 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 RPS6KC1Q96S38 1066 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 ZMYND8Q9ULU4 1186 aaPredicted RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 TELO2Q9Y4R8 837 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 RPTORQ8N122 1335 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 NVLO15381 856 aaKnown RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 SLC16A3O15427 465 aaKnown RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 ICAM1P05362 532 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 IGBP1P78318 339 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 KLC1Q07866 573 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 XRCC4Q13426 336 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 NXNQ6DKJ4 435 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 RGS9BPQ6ZS82 235 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 LRRC6Q86X45 466 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 MRIQ9BWK5 157 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 FHDC1Q9C0D6 1143 aaPredicted RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 IFT122Q9HBG6 1241 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 FBXO6Q9NRD1 293 aaPredicted RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 SBF2Q86WG5 1849 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 MYH4Q9Y623 1939 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 LPXNO60711 386 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 STAM2O75886 525 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 DCTN3O75935 186 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 ITIH2P19823 946 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 MMP13P45452 471 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 MRPS9P82933 396 aaKnown RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 C11orf63Q6NUN7 778 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 TRMT10CQ7L0Y3 403 aaKnown RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 KCTD6Q8NC69 237 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 MAIP1Q8WWC4 291 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 NGRNQ9NPE2 291 aaKnown RBP13.94□□□□□ -0.18
NFKB1-202ENST00000394820 NHSQ6T4R5 1651 aa13.94□□□□□ -0.18
NFKB1-202ENST00000394820 COL24A1Q17RW2 1714 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 ASAP2O43150 1006 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 COG7P83436 770 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 PDIK1LQ8N165 341 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 PGM2Q96G03 612 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 PAGR1Q9BTK6 254 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 DEFB129Q9H1M3 183 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 VCAM1P19320 739 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 PSMA2P25787 234 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 NRLP54845 237 aa13.93□□□□□ -0.18
NFKB1-202ENST00000394820 MARSP56192 900 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms