RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 EIF3HO15372 352 aaKnown RBP eCLIP15.19■□□□□ 0.02
MKS1-203ENST00000393120 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 GTF2A2P52657 109 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 KLF1Q13351 362 aaPredicted RBP15.19■□□□□ 0.02
MKS1-203ENST00000393120 AMHR2Q16671 573 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 C2CD6Q53TS8 623 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 SGO2Q562F6 1265 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 EAPPQ56P03 285 aaPredicted RBP15.19■□□□□ 0.02
MKS1-203ENST00000393120 LRRC38Q5VT99 294 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 LLGL2Q6P1M3 1020 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 ANKRD23Q86SG2 305 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 SH2D3CQ8N5H7 860 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 WHRNQ9P202 907 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 ATP8A1Q9Y2Q0 1164 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 GPR25O00155 361 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 NR1D1P20393 614 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 TMOD1P28289 359 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 PMS2P54278 862 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 PHLDB2Q86SQ0 1253 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 ARFGAP2Q8N6H7 521 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 C16orf70Q9BSU1 422 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 BCO2Q9BYV7 579 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 LHX5Q9H2C1 402 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 EPB41L4BQ9H329 900 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 ASB7Q9H672 318 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 VRTNQ9H8Y1 702 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 GRIN2DO15399 1336 aa15.18■□□□□ 0.02
MKS1-203ENST00000393120 BTBD19C9JJ37 291 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 PAEPP09466 180 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 HOXD8P13378 290 aaPredicted RBP15.17■□□□□ 0.02
MKS1-203ENST00000393120 ATICP31939 592 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 TAS2R40P59535 323 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 SLMAPQ14BN4 828 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 TMEM132AQ24JP5 1023 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 WDTC1Q8N5D0 677 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 OR2W6PQ8NHA6 318 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 GRK7Q8WTQ7 553 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 AFG1LQ8WV93 481 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 DCLK3Q9C098 648 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.17■□□□□ 0.02
MKS1-203ENST00000393120 SRRM3A6NNA2 597 aaPredicted RBP15.17■□□□□ 0.02
MKS1-203ENST00000393120 SNAI1O95863 264 aaPredicted RBP15.17■□□□□ 0.02
MKS1-203ENST00000393120 WEE2P0C1S8 567 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 STAG3L1P0CL83 205 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 CXCL8P10145 99 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 CD58P19256 250 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 ITIH2P19823 946 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 BRD2P25440 801 aaKnown RBP15.17■□□□□ 0.02
MKS1-203ENST00000393120 KCNJ1P48048 391 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 GNGT1P63211 74 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 FKBP1BP68106 108 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 CCNG2Q16589 344 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 PPP1R15BQ5SWA1 713 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 CROCCP2Q86T23 111 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 RCOR2Q8IZ40 523 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 NIPA2Q8N8Q9 360 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 CEP120Q8N960 986 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 ATL2Q8NHH9 583 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 CXorf38Q8TB03 319 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 TFAP2BQ92481 460 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 ZBTB10Q96DT7 871 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 FAM124BQ9H5Z6 455 aaPredicted RBP15.17■□□□□ 0.02
MKS1-203ENST00000393120 SIX4Q9UIU6 781 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 STRIP2Q9ULQ0 834 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 CEP83Q9Y592 693 aa15.17■□□□□ 0.02
MKS1-203ENST00000393120 A0A087WZ62 844 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 LACTBL1A8MY62 500 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 MED7O43513 233 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 ZEB2O60315 1214 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 RARGP13631 454 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 SSTR3P32745 418 aaPredicted RBP15.16■□□□□ 0.02
MKS1-203ENST00000393120 CETN2P41208 172 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 IGBP1P78318 339 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 PTK6Q13882 451 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 PPP1R7Q15435 360 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 ZNF667Q5HYK9 610 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 MTHFD1LQ6UB35 978 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 C1orf54Q8WWF1 131 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 ZNF668Q96K58 619 aaPredicted RBP15.16■□□□□ 0.02
MKS1-203ENST00000393120 FDXACB1Q9BRP7 624 aaPredicted RBP15.16■□□□□ 0.02
MKS1-203ENST00000393120 HERPUD2Q9BSE4 406 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 TMEM109Q9BVC6 243 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 TSPYL1Q9H0U9 437 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 PDZD7Q9H5P4 517 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 IVNS1ABPQ9Y6Y0 642 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 SCN4AP35499 1836 aa15.16■□□□□ 0.02
MKS1-203ENST00000393120 CCL15-CCL14A0A0B4J2E2 113 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 GAS8O95995 478 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 RALAP11233 206 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 OSTNP61366 133 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 CALCOCO2Q13137 446 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 PIGHQ14442 188 aaPredicted RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 CCL15Q16663 113 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 KCTD19Q17RG1 926 aaPredicted RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 DNAJC21Q5F1R6 531 aaKnown RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 GJC2Q5T442 439 aaPredicted RBP15.15■□□□□ 0.02
MKS1-203ENST00000393120 DNAJC24Q6P3W2 148 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 ERICH1Q86X53 443 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 TMEM192Q8IY95 271 aa15.15■□□□□ 0.02
MKS1-203ENST00000393120 C1orf127Q8N9H9 656 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms