RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 LINC01465Q8N7H1 131 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 PPTC7Q8NI37 304 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 MAIP1Q8WWC4 291 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 TFAP2BQ92481 460 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 SLCO2A1Q92959 643 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 MS4A4AQ96JQ5 239 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 CHST7Q9NS84 486 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 USTQ9Y2C2 406 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 ZSWIM8A7E2V4 1837 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 A0A087WZ62 844 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 BTBD19C9JJ37 291 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 ZNF286BP0CG31 522 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 PMS2P54278 862 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 POU5F1BQ06416 359 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 MKRN3Q13064 507 aaKnown RBP27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 FDXACB1Q9BRP7 624 aaPredicted RBP27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 EPB41L4BQ9H329 900 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 POLIQ9UNA4 740 aa27.19■■□□□ 1.94
SMARCD3-203ENST00000392811 RBM47A0AV96 593 aaKnown RBP27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 EIF3HO15372 352 aaKnown RBP eCLIP27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 CALB1P05937 261 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 CETPP11597 493 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 MAN1A1P33908 653 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 ADCYAP1R1P41586 468 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 RPL7AP62424 266 aaKnown RBP27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 PDCLQ13371 301 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 AMHR2Q16671 573 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 FAM187BQ17R55 369 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 CCDC50Q8IVM0 306 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 TMEM35BQ8NCS4 154 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 ATG4AQ8WYN0 398 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 NXF1Q9UBU9 619 aaKnown RBP27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 SRCAPQ6ZRS2 3230 aa27.18■■□□□ 1.94
SMARCD3-203ENST00000392811 MAGEB2O15479 319 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 NFICP08651 508 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 KRT19P08727 400 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 PPP1R7Q15435 360 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 KATNAL2Q8IYT4 538 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 KATNBL1Q9H079 304 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 MTRF1LQ9UGC7 380 aaKnown RBP27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 IP6K2Q9UHH9 426 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 SIX4Q9UIU6 781 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 AKT3Q9Y243 479 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 SCN4AP35499 1836 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 CCL15-CCL14A0A0B4J2E2 113 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 TMEM191CA6NGB0 347 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 MEFVO15553 781 aaPredicted RBP27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 RALAP11233 206 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 CCL15Q16663 113 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 WDTC1Q8N5D0 677 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 ART4Q93070 314 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 EMID1Q96A84 441 aaPredicted RBP27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 PABPC3Q9H361 631 aaKnown RBP27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 LRRC4CQ9HCJ2 640 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 PCDHGC3Q9UN70 934 aa27.17■■□□□ 1.94
SMARCD3-203ENST00000392811 TCRBV5S1A1TA0A578 114 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 A6NNZ2 444 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 PPFIA4O75335 1185 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 STAG3L1P0CL83 205 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 SSR1P43307 286 aaKnown RBP27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 KRT17Q04695 432 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 TUBB8Q3ZCM7 444 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 IFNLR1Q8IU57 520 aaPredicted RBP27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 TMEM130Q8N3G9 435 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 C16orf70Q9BSU1 422 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 HEMGNQ9BXL5 484 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 DCLK3Q9C098 648 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 ZNF518BQ9C0D4 1074 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 R3HDM2Q9Y2K5 976 aaKnown RBP27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 SLC45A1Q9Y2W3 748 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 IQCA1LA6NCM1 817 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 LACTBL1A8MY62 500 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 VTNP04004 478 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 MCF2P10911 925 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 GJC1P36383 396 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 RAP1GAPP47736 663 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 KLF1Q13351 362 aaPredicted RBP27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 C1orf127Q8N9H9 656 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 PDZD7Q9H5P4 517 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 CLEC11AQ9Y240 323 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 IVNS1ABPQ9Y6Y0 642 aa27.16■■□□□ 1.94
SMARCD3-203ENST00000392811 SNAI1O95863 264 aaPredicted RBP27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 CDH5P33151 784 aaPredicted RBP27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 EIF3BP55884 814 aaKnown RBP27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 YWHAEP62258 255 aaKnown RBP27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 IFFO1Q0D2I5 559 aa27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 KRT71Q3SY84 523 aa27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 AGBL2Q5U5Z8 902 aa27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 DNAJC24Q6P3W2 148 aa27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 BRI3BPQ8WY22 251 aa27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 CPB2Q96IY4 423 aa27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 BCCIPQ9P287 314 aaKnown RBP eCLIP27.15■■□□□ 1.94
SMARCD3-203ENST00000392811 STRNO43815 780 aa27.14■■□□□ 1.94
SMARCD3-203ENST00000392811 EIF4BP23588 611 aaKnown RBP27.14■■□□□ 1.94
SMARCD3-203ENST00000392811 HPDP32754 393 aaPredicted RBP27.14■■□□□ 1.94
SMARCD3-203ENST00000392811 GTF2A2P52657 109 aa27.14■■□□□ 1.94
SMARCD3-203ENST00000392811 ZNF252P-AS1Q0IIN9 211 aa27.14■■□□□ 1.94
SMARCD3-203ENST00000392811 MAP1SQ66K74 1059 aaPredicted RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms