RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 KDM4CQ9H3R0 1056 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 RNPEPQ9H4A4 650 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 PLEKHA4Q9H4M7 779 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 NOL6Q9H6R4 1146 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 DDX31Q9H8H2 851 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 IL21RQ9HBE5 538 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 SEMA4BQ9NPR2 832 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 HIF1ANQ9NWT6 349 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 NLRP2Q9NX02 1062 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 GALNT8Q9NY28 637 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 CLDND1Q9NY35 253 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 PLK2Q9NYY3 685 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 CLEC1BQ9P126 229 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 POGKQ9P215 609 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 SAE1Q9UBE0 346 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 DNAJB11Q9UBS4 358 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 SUCOQ9UBS9 1254 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 MAN1B1Q9UKM7 699 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 IKZF3Q9UKT9 509 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 DENND2AQ9ULE3 1009 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 CDC14AQ9UNH5 594 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 COG5Q9UP83 839 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 EFR3BQ9Y2G0 817 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF256Q9Y2P7 627 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 NOC2LQ9Y3T9 749 aaKnown RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF175Q9Y473 711 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 MMACHCQ9Y4U1 282 aa-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 MAFBQ9Y5Q3 323 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ28-201ENST00000390509 HERC1Q15751 4861 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 NID2Q14112 1375 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 ADAMTS9Q9P2N4 1935 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 IGKV1D-17A0A075B6S4 117 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 A0A0B4J269 797 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 A0A0G2JLM5 398 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 WDR27A2RRH5 827 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 LRCOL1A6NCL2 159 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 TMEM232C9JQI7 657 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 POC1B-GALNT4F8VUJ3 575 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 UBE2Q2LH0YL09 131 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF213O14771 459 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 NKRFO15226 690 aaKnown RBP eCLIP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 ARHGEF9O43307 516 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 KCNQ3O43525 872 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 UGDHO60701 494 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 SLC22A3O75751 556 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 SLITRK3O94933 977 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 WDR47O94967 919 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 GPANK1O95872 356 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 AMBPP02760 352 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 KLKB1P03952 638 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 A1BGP04217 495 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 EDN1P05305 212 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 PRSS2P07478 247 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 ELANEP08246 267 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 HOXC4P09017 264 aaPredicted RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 HOXC6P09630 235 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 CYP2A6P11509 494 aaPredicted RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 FCGR1AP12314 374 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 HGFP14210 728 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 GSPT1P15170 499 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 DPEP1P16444 411 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF16P17020 682 aaPredicted RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 NPR3P17342 541 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 NDUFB7P17568 137 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 AMD1P17707 334 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 RXRAP19793 462 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 FGFR4P22455 802 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 CD40P25942 277 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 APEX1P27695 318 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 SHC1P29353 583 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 CRKP46108 304 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 POLD2P49005 469 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 ALDH7A1P49419 539 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 CARSP49589 748 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 CLK1P49759 484 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF84P51523 738 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 CHN2P52757 468 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 PMS1P54277 932 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 UCNP55089 124 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 NXPH1P58417 271 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 SEC61A1P61619 476 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 B4GALNT1Q00973 533 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 RUNX1T1Q06455 604 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 CRYZQ08257 329 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 KIF5AQ12840 1032 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 MRPL49Q13405 166 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 LSAMPQ13449 338 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 PPP2R5DQ14738 602 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 PTGR1Q14914 329 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 TCEAL1Q15170 157 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 CYP2A13Q16696 494 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 KIF19Q2TAC6 998 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 PABPC1LQ4VXU2 614 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 PLEKHO1Q53GL0 409 aaPredicted RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 ANKRD39Q53RE8 183 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 HERC4Q5GLZ8 1057 aaPredicted RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 PLAC9Q5JTB6 97 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 AARS2Q5JTZ9 985 aaKnown RBP-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 LDLRAD1Q5T700 205 aa-0.18□□□□□ -2.44
TRAJ28-201ENST00000390509 NSUN5P2Q63ZY6 315 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms