RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 PALM3A6NDB9 673 aaPredicted RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 ESRRBO95718 433 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 PDGFRAP16234 1089 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 RASA2Q15283 850 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 FAM47CQ5HY64 1035 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 MROH9Q5TGP6 573 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 RWDD4Q6NW29 188 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 WDR59Q6PJI9 974 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 ZNF662Q6ZS27 426 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 PRCCQ92733 491 aaPredicted RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 OPTNQ96CV9 577 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 NMD3Q96D46 503 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 PGBD4Q96DM1 585 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 MTRQ99707 1265 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 FRMD8Q9BZ67 464 aaPredicted RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 DDX28Q9NUL7 540 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 SLC24A2Q9UI40 661 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 STAP1Q9ULZ2 295 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 CLEC11AQ9Y240 323 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 FLT1P17948 1338 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 SPATA31A3Q5VYP0 1347 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 COL3A1P02461 1466 aaPredicted RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 STRNO43815 780 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 ATP9BO43861 1147 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 RPS6KA4O75676 772 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 KRT16P08779 473 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 EPHB2P29323 1055 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 CDC25CP30307 473 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 RPL21P46778 160 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 DDR1Q08345 913 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 SPDYCQ5MJ68 293 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 ITPRIPL1Q6GPH6 555 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 C16orf86Q6ZW13 317 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 RNF135Q8IUD6 432 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 ZNF34Q8IZ26 560 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.06□□□□□ -0.961e-7■■■■■ 35.3
PKP4-202ENST00000389759 TMEM237Q96Q45 408 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 ADNPQ9H2P0 1102 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 UNC45AQ9H3U1 944 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 MRGBPQ9NV56 204 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 TSC22D4Q9Y3Q8 395 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 GTPBP10A4D1E9 387 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 RCCD1A6NED2 376 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 H0Y626 953 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 DAB1O75553 588 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 TRIM16O95361 564 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 ACOT2P49753 483 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 MRPS15P82914 257 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 NCOA4Q13772 614 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 ADRM1Q16186 407 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 ARHGAP22Q7Z5H3 698 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 CDR2LQ86X02 465 aaPredicted RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 TTC39CQ8N584 583 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 PALMDQ9NP74 551 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 FEM1BQ9UK73 627 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 COL15A1P39059 1388 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 C16orf96A6NNT2 1141 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 ANGPT2O15123 496 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 HLA-DRAP01903 254 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 R3HDM1Q15032 1099 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 WDR72Q3MJ13 1102 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 NT5DC3Q86UY8 548 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 IQCKQ8N0W5 287 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 CNBD2Q96M20 576 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 MRPL4Q9BYD3 311 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 TDRD3Q9H7E2 651 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 RSAD1Q9HA92 442 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 OLFML3Q9NRN5 406 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 CPSF3Q9UKF6 684 aaKnown RBP9.06□□□□□ -0.96
PKP4-202ENST00000389759 BLOC1S6Q9UL45 172 aa9.06□□□□□ -0.96
PKP4-202ENST00000389759 PSTPIP1O43586 416 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 SGPL1O95470 568 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 DAB2P98082 770 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 NKX1-1Q15270 411 aaPredicted RBP9.05□□□□□ -0.96
PKP4-202ENST00000389759 SF3B3Q15393 1217 aaKnown RBP9.05□□□□□ -0.96
PKP4-202ENST00000389759 C11orf63Q6NUN7 778 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 FAM71DQ8N9W8 422 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 NSUN6Q8TEA1 469 aaKnown RBP9.05□□□□□ -0.96
PKP4-202ENST00000389759 PPP2R3CQ969Q6 453 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 FAM167AQ96KS9 214 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 PPP1R16BQ96T49 567 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 TMEM120AQ9BXJ8 343 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 RAVER2Q9HCJ3 691 aaKnown RBP9.05□□□□□ -0.96
PKP4-202ENST00000389759 LMTK2Q8IWU2 1503 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 OPLAHO14841 1288 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 DGAT1O75907 488 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 TMCC1O94876 653 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 CBX6O95503 412 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 POLD1P28340 1107 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 SPRP35270 261 aaPredicted RBP9.05□□□□□ -0.96
PKP4-202ENST00000389759 RFC5P40937 340 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 CCNG2Q16589 344 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 SMTNL2Q2TAL5 461 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 PRUNE1Q86TP1 453 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 TMPRSS6Q8IU80 811 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 PCYOX1LQ8NBM8 494 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 DDHD1Q8NEL9 900 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 CLMNQ96JQ2 1002 aa9.05□□□□□ -0.96
PKP4-202ENST00000389759 PAFAH2Q99487 392 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms