RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 C2CD6Q53TS8 623 aa16.23■□□□□ 0.19
ALK-201ENST00000389048 ISLR2Q6UXK2 745 aa16.23■□□□□ 0.19
ALK-201ENST00000389048 ZIM3Q96PE6 472 aa16.23■□□□□ 0.19
ALK-201ENST00000389048 DCP1AQ9NPI6 582 aaPredicted RBP16.23■□□□□ 0.19
ALK-201ENST00000389048 MRPL42Q9Y6G3 142 aaKnown RBP16.23■□□□□ 0.19
ALK-201ENST00000389048 RPS7P62081 194 aaKnown RBP16.22■□□□□ 0.19
ALK-201ENST00000389048 DDX39BQ13838 428 aaKnown RBP16.22■□□□□ 0.19
ALK-201ENST00000389048 PGS1Q32NB8 556 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 ZNF614Q8N883 585 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
ALK-201ENST00000389048 C2orf40Q9H1Z8 148 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 MANSC1Q9H8J5 431 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 FHOD1Q9Y613 1164 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 F5H6K3 240 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 KCNK10P57789 538 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 KLRC3Q07444 240 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 CENPPQ6IPU0 288 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 SH3BP5LQ7L8J4 393 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 CELF1Q92879 486 aaKnown RBP16.22■□□□□ 0.19
ALK-201ENST00000389048 ENDOD1O94919 500 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 PGK2P07205 417 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 RAD51Q06609 339 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 SEZ6Q53EL9 994 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 TTC33Q6PID6 262 aaPredicted RBP16.22■□□□□ 0.19
ALK-201ENST00000389048 MTHFD1LQ6UB35 978 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 KCNB2Q92953 911 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 ARHGEF26Q96DR7 871 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 FOPNLQ96NB1 174 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 HERC5Q9UII4 1024 aaKnown RBP16.22■□□□□ 0.19
ALK-201ENST00000389048 C16orf96A6NNT2 1141 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 AGTP01019 485 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 MLNP12872 115 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 MTMR2Q13614 643 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 VEPH1Q14D04 833 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 MGAT5BQ3V5L5 792 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 TTC39BQ5VTQ0 682 aaPredicted RBP16.22■□□□□ 0.19
ALK-201ENST00000389048 LUZP2Q86TE4 346 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 XPO6Q96QU8 1125 aaKnown RBP16.22■□□□□ 0.19
ALK-201ENST00000389048 SLC40A1Q9NP59 571 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 PEG3Q9GZU2 1588 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 RSPH10B2B2RC85 870 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 UBXN8O00124 270 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 RSPH10BP0C881 870 aa16.22■□□□□ 0.19
ALK-201ENST00000389048 SRBD1Q8N5C6 995 aaKnown RBP16.22■□□□□ 0.19
ALK-201ENST00000389048 HEG1Q9ULI3 1381 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 PVALEFA0A1B0GWK0 134 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 DNAJC3Q13217 504 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 GOLGA7BQ2TAP0 167 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 DCAF6Q58WW2 860 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
ALK-201ENST00000389048 NSMCE4AQ9NXX6 385 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 SCN3BQ9NY72 215 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 ARAP3Q8WWN8 1544 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 ARHGEF12Q9NZN5 1544 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 FAM47DPA6NHR8 397 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 PYGMP11217 842 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 DMPKQ09013 629 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 P3H2Q8IVL5 708 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 GGPS1O95749 300 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 DENND5BQ6ZUT9 1274 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 REEP2Q9BRK0 252 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 MXD3Q9BW11 206 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 ELP3Q9H9T3 547 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.21■□□□□ 0.19
ALK-201ENST00000389048 SOX13Q9UN79 622 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 SLC30A1Q9Y6M5 507 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 USP1O94782 785 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 RHOBTB1O94844 696 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 ZBTB7AO95365 584 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 GLRBP48167 497 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 PPP1R18Q6NYC8 613 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 IFNLR1Q8IU57 520 aaPredicted RBP16.21■□□□□ 0.19
ALK-201ENST00000389048 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
ALK-201ENST00000389048 HSMCR30P0CW71 290 aa16.21■□□□□ 0.18
ALK-201ENST00000389048 POU1F1P28069 291 aa16.21■□□□□ 0.18
ALK-201ENST00000389048 HMGCS2P54868 508 aa16.21■□□□□ 0.18
ALK-201ENST00000389048 PRAMEF18Q5VWM3 479 aa16.21■□□□□ 0.18
ALK-201ENST00000389048 MB21D2Q8IYB1 491 aaPredicted RBP16.21■□□□□ 0.18
ALK-201ENST00000389048 THUMPD3Q9BV44 507 aaKnown RBP16.21■□□□□ 0.18
ALK-201ENST00000389048 KCTD10Q9H3F6 313 aa16.21■□□□□ 0.18
ALK-201ENST00000389048 CCDC134Q9H6E4 229 aa16.21■□□□□ 0.18
ALK-201ENST00000389048 CYBBP04839 570 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 HPCAP84074 193 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 LAMC2Q13753 1193 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 ARHGEF7Q14155 803 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 DNAL1Q4LDG9 190 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.2■□□□□ 0.18
ALK-201ENST00000389048 APEX2Q9UBZ4 518 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 HAO1Q9UJM8 370 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 COMTP21964 271 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 MAGEA4P43358 317 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 OR8H2Q8N162 312 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 RBBP8NLQ8NC74 664 aaPredicted RBP16.2■□□□□ 0.18
ALK-201ENST00000389048 SPATA18Q8TC71 538 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 PPP1R14AQ96A00 147 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 FAM20AQ96MK3 541 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 NDUFB5O43674 189 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 CYP4F12Q9HCS2 524 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 KLHL18O94889 574 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms