RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 CACNA2D2Q9NY47 1150 aa-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 HSPBP1Q9NZL4 362 aa-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 THYN1Q9P016 225 aa-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 STIM2Q9P246 746 aa-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 RCC2Q9P258 522 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ZNF319Q9P2F9 582 aa-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 KLHL13Q9P2N7 655 aa-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 EIF2B4Q9UI10 523 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 CRLS1Q9UJA2 301 aa-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 SCAF8Q9UPN6 1271 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 MAGED1Q9Y5V3 778 aaPredicted RBP-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ALMS1Q8TCU4 4167 aa-1.75□□□□□ -2.69
RNU6-1340P-201ENST00000384438 NBEAL2Q6ZNJ1 2754 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 NIPBLQ6KC79 2804 aaeCLIP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 IGKV2-28A0A075B6P5 120 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 SSU72P8A0A1W2PR75 194 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 METTL12A8MUP2 240 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 DGKIO75912 1065 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 IGKV2D-28P01615 120 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 LRG1P02750 347 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ASNSP08243 561 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 GSTP1P09211 210 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 FAM163BP0C2L3 166 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ENDOUP21128 410 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 IL1R2P27930 398 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 APLNRP35414 380 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 PGFP49763 221 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 RIPK4P57078 832 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 MECOMQ03112 1051 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 CTDSPL2Q05D32 466 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 MGAT3Q09327 533 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 KIAA0141Q14154 515 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 CLEC16AQ2KHT3 1053 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 TAF1BQ53T94 588 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 Q5PR19 223 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 PHF19Q5T6S3 580 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 MEX3CQ5U5Q3 659 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 PRAMEF13Q5VWM6 474 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ANKRD26P1Q6NSI1 321 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 SWSAP1Q6NVH7 229 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ARMC6Q6NXE6 501 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 MIS18BP1Q6P0N0 1132 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 TEPPQ6URK8 271 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 CCBE1Q6UXH8 406 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 FAM83HQ6ZRV2 1179 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 TRMT1LQ7Z2T5 733 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 GRINAQ7Z429 371 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 PEG10Q86TG7 708 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 FAM217AQ8IXS0 508 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 TMEM61Q8N0U2 210 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 Q8N377 158 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 STAG2Q8N3U4 1231 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 C11orf42Q8N5U0 333 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 TEX45Q8NA69 505 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 KLHL30-AS1Q8NEE0 82 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 GPR156Q8NFN8 814 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 PHOSPHO2Q8TCD6 241 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 DDX54Q8TDD1 881 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 XAGE3Q8WTP9 111 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 OIT3Q8WWZ8 545 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 AKAP1Q92667 903 aaKnown RBP eCLIP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ZNF653Q96CK0 615 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 NUS1Q96E22 293 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 PRR11Q96HE9 360 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ZNF419Q96HQ0 510 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ZNF354BQ96LW1 612 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 DMRTB1Q96MA1 342 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 F2RL3Q96RI0 385 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 OPRPNQ99935 248 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 NDC1Q9BTX1 674 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 C2orf49Q9BVC5 232 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 TEX13BQ9BXU2 312 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 OR10A2Q9H208 303 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 PATZ1Q9HBE1 687 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ABI2Q9NYB9 513 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 KLK14Q9P0G3 267 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 G3BP2Q9UN86 482 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 KCNK7Q9Y2U2 307 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 CSADQ9Y600 493 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 RAD54BQ9Y620 910 aa-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 TDRD15B5MCY1 1934 aaKnown RBP-1.76□□□□□ -2.69
RNU6-1340P-201ENST00000384438 MUC17Q685J3 4493 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 NBPF19A0A087WUL8 3843 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 KLHL33A6NCF5 533 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 TAF4O00268 1085 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ARHGEF9O43307 516 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 C21orf2O43822 256 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 XPNPEP2O43895 674 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 PPP1R11O60927 126 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 IPO13O94829 963 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 TP53P04637 393 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 HLA-DOAP06340 250 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 CYP19A1P11511 503 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 PPP3CBP16298 524 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 ELK1P19419 428 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 IGFBP4P22692 258 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 FOLR3P41439 243 aa-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 MLLT3P42568 568 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-1340P-201ENST00000384438 LOXL3P58215 753 aa-1.77□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms