RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 DCAF4L1Q3SXM0 396 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 TMEM130Q8N3G9 435 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 HES6Q96HZ4 224 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 ZIM3Q96PE6 472 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 GTF3C4Q9UKN8 822 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 CES2O00748 559 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 THAP12O43422 761 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 TOMM70O94826 608 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 PGK1P00558 417 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 ITGB3P05106 788 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 CFHP08603 1231 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 GRM5P41594 1212 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 CARSP49589 748 aaKnown RBP20.69■□□□□ 0.9
SSU72-204ENST00000378726 ZNF132P52740 706 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 RNASE9P60153 205 aaKnown RBP20.69■□□□□ 0.9
SSU72-204ENST00000378726 TRIM32Q13049 653 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 PCBP1Q15365 356 aaKnown RBP eCLIP20.69■□□□□ 0.93e-9■■■□□ 16.4
SSU72-204ENST00000378726 DEFB115Q30KQ5 88 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 ALG6Q9Y672 507 aa20.69■□□□□ 0.9
SSU72-204ENST00000378726 ZSCAN5CA6NGD5 496 aaPredicted RBP20.68■□□□□ 0.9
SSU72-204ENST00000378726 EIF3HO15372 352 aaKnown RBP eCLIP20.68■□□□□ 0.9
SSU72-204ENST00000378726 CYP1A1P04798 512 aaPredicted RBP20.68■□□□□ 0.9
SSU72-204ENST00000378726 SSTR3P32745 418 aaPredicted RBP20.68■□□□□ 0.9
SSU72-204ENST00000378726 TMEM132DQ14C87 1099 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 WDR72Q3MJ13 1102 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 TTC31Q49AM3 519 aaPredicted RBP20.68■□□□□ 0.9
SSU72-204ENST00000378726 ZNF394Q53GI3 561 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 SLC27A1Q6PCB7 646 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 SCARA5Q6ZMJ2 495 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 APBB1IPQ7Z5R6 666 aaPredicted RBP20.68■□□□□ 0.9
SSU72-204ENST00000378726 ZNF606Q8WXB4 792 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 NUP85Q9BW27 656 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 SPC25Q9HBM1 224 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 GDF3Q9NR23 364 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 ESYT3A0FGR9 886 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 FAM153BP0C7A2 387 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 ASPAP45381 313 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 CAP1Q01518 475 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 FAM153CQ494X1 144 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 GLE1Q53GS7 698 aaKnown RBP20.68■□□□□ 0.9
SSU72-204ENST00000378726 ZNF667Q5HYK9 610 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 NAA35Q5VZE5 725 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 NOTUMQ6P988 496 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 CXCL17Q6UXB2 119 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 MCOLN2Q8IZK6 566 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 NME8Q8N427 588 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 TMEM40Q8WWA1 233 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 PPM1EQ8WY54 764 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 RUFY1Q96T51 708 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 MTG1Q9BT17 334 aaPredicted RBP20.68■□□□□ 0.9
SSU72-204ENST00000378726 EIF2AQ9BY44 585 aaKnown RBP20.68■□□□□ 0.9
SSU72-204ENST00000378726 SNTG2Q9NY99 539 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 CNOT8Q9UFF9 292 aaKnown RBP20.68■□□□□ 0.9
SSU72-204ENST00000378726 FAM153AQ9UHL3 310 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 POLIQ9UNA4 740 aa20.68■□□□□ 0.9
SSU72-204ENST00000378726 SEPT4O43236 478 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 CEP104O60308 925 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 MTA2O94776 668 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 SP3Q02447 781 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 CACNB2Q08289 660 aaPredicted RBP20.67■□□□□ 0.9
SSU72-204ENST00000378726 SNX17Q15036 470 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 TRIM72Q6ZMU5 477 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 PASD1Q8IV76 773 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 CXorf38Q8TB03 319 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 ZNF564Q8TBZ8 553 aaPredicted RBP20.67■□□□□ 0.9
SSU72-204ENST00000378726 BCAS4Q8TDM0 211 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 CAPNS2Q96L46 248 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 NFU1Q9UMS0 254 aa20.67■□□□□ 0.9
SSU72-204ENST00000378726 MGAMO43451 1857 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 HOXC8P31273 242 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 NSFP46459 744 aaKnown RBP20.66■□□□□ 0.9
SSU72-204ENST00000378726 MESDQ14696 234 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 CD302Q8IX05 232 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 IFT20Q8IY31 132 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 EPB41L5Q9HCM4 733 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 UVRAGQ9P2Y5 699 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 C2CD2Q9Y426 696 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 RARBP10826 455 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 CRYBB1P53674 252 aaPredicted RBP20.66■□□□□ 0.9
SSU72-204ENST00000378726 GUCY2DQ02846 1103 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 CENPCQ03188 943 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 NNTQ13423 1086 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 C11orf63Q6NUN7 778 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 NT5DC4Q86YG4 428 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 SH2D3CQ8N5H7 860 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 IFT81Q8WYA0 676 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 DPP3Q9NY33 737 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 AGAP1Q9UPQ3 857 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 ANK1P16157 1881 aa20.66■□□□□ 0.9
SSU72-204ENST00000378726 TMEM110-MUSTN1A8MSY1 372 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 HEXIM1O94992 359 aaKnown RBP20.65■□□□□ 0.9
SSU72-204ENST00000378726 POLR2BP30876 1174 aaKnown RBP20.65■□□□□ 0.9
SSU72-204ENST00000378726 ATICP31939 592 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 GUCY2FP51841 1108 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 NBPF20Q3BBV1 942 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 KIF12Q96FN5 646 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 PLEKHA5Q9HAU0 1116 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 RNF186Q9NXI6 227 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 HES2Q9Y543 173 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 KRT14P02533 472 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms