RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 PSMC3P17980 439 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 LIG1P18858 919 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 BRCC3P46736 316 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 MRPL58Q14197 206 aaKnown RBP13.23□□□□□ -0.29
LSM2-208ENST00000375661 FAM78AQ5JUQ0 283 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 CYP4A22Q5TCH4 519 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 POTEHQ6S545 545 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 ALKAL1Q6UXT8 129 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 DYMQ7RTS9 669 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 C3orf58Q8NDZ4 430 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 NETO1Q8TDF5 533 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 DDX12PQ92771 950 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 E2F7Q96AV8 911 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 PAGE5Q96GU1 130 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 DRC1Q96MC2 740 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 GBP4Q96PP9 640 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 CORO1BQ9BR76 489 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 GPR88Q9GZN0 384 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 MAGEF1Q9HAY2 307 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 TRPV4Q9HBA0 871 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 CYP4F11Q9HBI6 524 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 PARD6AQ9NPB6 346 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 LMBRD1Q9NUN5 540 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 USP25Q9UHP3 1055 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 ODF2LQ9ULJ1 636 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 INSL5Q9Y5Q6 135 aa13.23□□□□□ -0.29
LSM2-208ENST00000375661 NUP210Q8TEM1 1887 aaPredicted RBP13.23□□□□□ -0.29
LSM2-208ENST00000375661 KMT2BQ9UMN6 2715 aaPredicted RBP13.22□□□□□ -0.29
LSM2-208ENST00000375661 MYH11P35749 1972 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 GREB1Q4ZG55 1949 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 I3L4J1 428 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 K7ERI5 159 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
LSM2-208ENST00000375661 KCNE1P15382 129 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 IGFBP6P24592 240 aaPredicted RBP13.22□□□□□ -0.29
LSM2-208ENST00000375661 CASP1P29466 404 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 RPL9P32969 192 aaKnown RBP13.22□□□□□ -0.29
LSM2-208ENST00000375661 CNR2P34972 360 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 ZNF131P52739 623 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 EPHA5P54756 1037 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 UBE2HP62256 183 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 GRM2Q14416 872 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 NT5DC1Q5TFE4 455 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 IQCEQ6IPM2 695 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 KRBA2Q6ZNG9 492 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 GRAMD1CQ8IYS0 662 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 SMARCD2Q92925 531 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 ZNF512Q96ME7 567 aaPredicted RBP13.22□□□□□ -0.29
LSM2-208ENST00000375661 C7orf25Q9BPX7 421 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 TRIM9Q9C026 710 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 TMEM134Q9H6X4 195 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 LMAN1LQ9HAT1 526 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 GOLGA2P5Q9HBQ8 144 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 NDRG2Q9UN36 371 aaKnown RBP13.22□□□□□ -0.29
LSM2-208ENST00000375661 USP20Q9Y2K6 914 aa13.22□□□□□ -0.29
LSM2-208ENST00000375661 FRMD3A2A2Y4 597 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 DCDC2BA2VCK2 349 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 PODXLO00592 558 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 SLC30A4O14863 429 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 KRT37O76014 449 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 PAPSS2O95340 614 aaPredicted RBP13.21□□□□□ -0.29
LSM2-208ENST00000375661 SEC24AO95486 1093 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 CHRNB1P11230 501 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 PLS3P13797 630 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 GDI1P31150 447 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 AFMP43652 599 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 NPTX2P47972 431 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 CXCL12P48061 93 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 PEX3P56589 373 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 FAM160A1Q05DH4 1040 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 SOX4Q06945 474 aaPredicted RBP13.21□□□□□ -0.29
LSM2-208ENST00000375661 SPEM2Q0P670 501 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 CUL4BQ13620 913 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 CNNM4Q6P4Q7 775 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 VITQ6UXI7 678 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 SPEM1Q8N4L4 309 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 SPIRE2Q8WWL2 714 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 TCEAL4Q96EI5 215 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 SUSD3Q96L08 255 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 FIZ1Q96SL8 496 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 NTPCRQ9BSD7 190 aaKnown RBP13.21□□□□□ -0.29
LSM2-208ENST00000375661 KIFC3Q9BVG8 833 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 LRRC27Q9C0I9 530 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 BLZF1Q9H2G9 400 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 C17orf75Q9HAS0 396 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 AFF4Q9UHB7 1163 aaKnown RBP13.21□□□□□ -0.29
LSM2-208ENST00000375661 FBXL5Q9UKA1 691 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 NUB1Q9Y5A7 615 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 PIAS3Q9Y6X2 628 aa13.21□□□□□ -0.29
LSM2-208ENST00000375661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.2□□□□□ -0.3
LSM2-208ENST00000375661 CCDC169A6NNP5 214 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 ZNF263O14978 683 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 FAM13AO94988 1023 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 CCR2P41597 374 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 AMPD3Q01432 767 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 LRRC32Q14392 662 aa13.2□□□□□ -0.3
LSM2-208ENST00000375661 CSRP2Q16527 193 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms