RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ITGA9Q13797 1035 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 POTEGQ6S5H5 508 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 SYDE1Q6ZW31 735 aaPredicted RBP21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 RELL1Q8IUW5 271 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 MORC4Q8TE76 937 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 FAM118BQ9BPY3 351 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 IQCGQ9H095 443 aaKnown RBP21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 INTS2Q9H0H0 1204 aaKnown RBP21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 EPB41L1Q9H4G0 881 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 APEX2Q9UBZ4 518 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 SH3GLB1Q9Y371 365 aa21.71■■□□□ 1.07
TMEFF1-201ENST00000374879 RBM47A0AV96 593 aaKnown RBP21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 MED24O75448 989 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 UBE2SQ16763 222 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 FAM182BQ5T319 152 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 FAM186BQ8IYM0 893 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 SLC5A5Q92911 643 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 CFAP57Q96MR6 1250 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 REEP2Q9BRK0 252 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 MAF1Q9H063 256 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 USP29Q9HBJ7 922 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 SAYSD1Q9NPB0 183 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 NDUFA13Q9P0J0 144 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 R3HDM2Q9Y2K5 976 aaKnown RBP21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 EMP3P54852 163 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 PSMC6P62333 389 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 PCNX4Q63HM2 1172 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 TDRPQ86YL5 185 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 DCLK3Q9C098 648 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 PCDH18Q9HCL0 1135 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 CD209Q9NNX6 404 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 ZDHHC7Q9NXF8 308 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 SENP1Q9P0U3 644 aa21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 PAIP2BQ9ULR5 123 aaKnown RBP21.7■■□□□ 1.06
TMEFF1-201ENST00000374879 RSPH10B2B2RC85 870 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 FCHO1O14526 889 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 RSPH10BP0C881 870 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 UQCRBP14927 111 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 VARSP26640 1264 aaKnown RBP21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 GTF2H1P32780 548 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 STAT3P40763 770 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 GPSM2P81274 684 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 DLG1Q12959 904 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 MSLNQ13421 630 aaPredicted RBP21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 TRMT5Q32P41 509 aaKnown RBP21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 RBM15BQ8NDT2 890 aaKnown RBP21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 ZNF564Q8TBZ8 553 aaPredicted RBP21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 NUP85Q9BW27 656 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 DNAJB4Q9UDY4 337 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 MTO1Q9Y2Z2 717 aaKnown RBP21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 SPDYE16A6NNV3 312 aaPredicted RBP21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 CIB2O75838 187 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 UFL1O94874 794 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 TRIM49P0CI25 452 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 TRIM49CP0CI26 452 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 ASPHQ12797 758 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 SH3D19Q5HYK7 790 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 LPCAT4Q643R3 524 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 NSMFQ6X4W1 530 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 TMPRSS6Q8IU80 811 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 IRGQQ8WZA9 623 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 PPP1R14BQ96C90 147 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 PCDHB18PQ96TA0 734 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 THTPAQ9BU02 230 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 RUSC1Q9BVN2 902 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 MANSC1Q9H8J5 431 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 ARHGEF38Q9NXL2 777 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 SLC7A8Q9UHI5 535 aa21.69■■□□□ 1.06
TMEFF1-201ENST00000374879 DDX60LQ5H9U9 1706 aaKnown RBP21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 USP17L5A8MUK1 530 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 STK10O94804 968 aaKnown RBP21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 GCNT3O95395 438 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 VCLP18206 1134 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 CYLC2Q14093 348 aaPredicted RBP21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 FASTKD3Q14CZ7 662 aaKnown RBP21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 KLHDC10Q6PID8 442 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 ULK2Q8IYT8 1036 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 GRK7Q8WTQ7 553 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 GAB3Q8WWW8 586 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 PRICKLE1Q96MT3 831 aaPredicted RBP21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 NMUR2Q9GZQ4 415 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 BCS1LQ9Y276 419 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 CCDC160A6NGH7 325 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 BTBD19C9JJ37 291 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 MEIS1O00470 390 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 VIL1P09327 827 aaKnown RBP21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 ARL4CP56559 192 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 C6orf163Q5TEZ5 329 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 C1orf146Q5VVC0 180 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 TSSK1BQ9BXA7 367 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 TSPYL2Q9H2G4 693 aaPredicted RBP21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 ACP6Q9NPH0 428 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 WDR37Q9Y2I8 494 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 NEU2Q9Y3R4 380 aa21.68■■□□□ 1.06
TMEFF1-201ENST00000374879 TGFB1I1O43294 461 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 MTA2O94776 668 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 ENO1P06733 434 aaKnown RBP21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 AQP4P55087 323 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 TBL3Q12788 808 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms