RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
PTPN20-202ENST00000374339 UROC1Q96N76 676 aa10.37□□□□□ -0.75
PTPN20-202ENST00000374339 MMS19Q96T76 1030 aa10.37□□□□□ -0.75
PTPN20-202ENST00000374339 SYT11Q9BT88 431 aa10.37□□□□□ -0.75
PTPN20-202ENST00000374339 PPP1R12CQ9BZL4 782 aa10.37□□□□□ -0.75
PTPN20-202ENST00000374339 GDAP2Q9NXN4 497 aa10.37□□□□□ -0.75
PTPN20-202ENST00000374339 KANSL3Q9P2N6 904 aa10.37□□□□□ -0.75
PTPN20-202ENST00000374339 NAGPAQ9UK23 515 aa10.37□□□□□ -0.75
PTPN20-202ENST00000374339 NOCTQ9UK39 431 aaKnown RBP10.37□□□□□ -0.75
PTPN20-202ENST00000374339 INTUQ9ULD6 942 aa10.37□□□□□ -0.75
PTPN20-202ENST00000374339 PCDHA13Q9Y5I0 950 aa10.37□□□□□ -0.75
PTPN20-202ENST00000374339 MEIS3P2A8K0S8 358 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 KPNA7A9QM74 516 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 ENPP3O14638 875 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 MED7O43513 233 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 PAEPP09466 180 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 WEE2P0C1S8 567 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 GZMAP12544 262 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 CD58P19256 250 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 GNA15P30679 374 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 SCNN1GP51170 649 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 ZNF132P52740 706 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 CCL23P55773 120 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 INCA1Q0VD86 236 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 CCDC122Q5T0U0 273 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 TRIM72Q6ZMU5 477 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 DPH6Q7L8W6 267 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 NOP9Q86U38 636 aaKnown RBP10.36□□□□□ -0.75
PTPN20-202ENST00000374339 RTN4RL1Q86UN2 441 aaPredicted RBP10.36□□□□□ -0.75
PTPN20-202ENST00000374339 GPIHBP1Q8IV16 184 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 GLYCTKQ8IVS8 523 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 ABI1Q8IZP0 508 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 GSTCDQ8NEC7 633 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 SLC30A5Q8TAD4 765 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 LINC01599Q8WXQ3 324 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 ELMO3Q96BJ8 720 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 SCLYQ96I15 445 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 WNT8AQ9H1J5 351 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 CXCL16Q9H2A7 254 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 LZTFL1Q9NQ48 299 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 SEPT11Q9NVA2 429 aaKnown RBP10.36□□□□□ -0.75
PTPN20-202ENST00000374339 KIAA1257Q9ULG3 409 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 LRFN2Q9ULH4 789 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 REXO2Q9Y3B8 237 aaKnown RBP10.36□□□□□ -0.75
PTPN20-202ENST00000374339 PCDHB7Q9Y5E2 793 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 SNX9Q9Y5X1 595 aa10.36□□□□□ -0.75
PTPN20-202ENST00000374339 BRCA2P51587 3418 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 SCN5AQ14524 2016 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 ARHGEF37A1IGU5 675 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 ZNF263O14978 683 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 KIAA0355O15063 1070 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 KIF5CO60282 957 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 HUS1O60921 280 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 EFCAB14O75071 495 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 TIMP1P01033 207 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 PFKMP08237 780 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 FAM163BP0C2L3 166 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 LILRA4P59901 499 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 SOX4Q06945 474 aaPredicted RBP10.35□□□□□ -0.75
PTPN20-202ENST00000374339 TUSC3Q13454 348 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 IKBKEQ14164 716 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 GPNMBQ14956 572 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 NOMO2Q5JPE7 1267 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 DNTTIP2Q5QJE6 756 aaKnown RBP10.35□□□□□ -0.75
PTPN20-202ENST00000374339 SCARA3Q6AZY7 606 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 CNKSR3Q6P9H4 555 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 NYAP1Q6ZVC0 841 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 RPUSD2Q8IZ73 545 aaKnown RBP10.35□□□□□ -0.75
PTPN20-202ENST00000374339 APPL2Q8NEU8 664 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 C16orf45Q96MC5 204 aaPredicted RBP10.35□□□□□ -0.75
PTPN20-202ENST00000374339 PDCL3Q9H2J4 239 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 SMYD3Q9H7B4 428 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 MYO1AQ9UBC5 1043 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 BARX2Q9UMQ3 279 aaPredicted RBP10.35□□□□□ -0.75
PTPN20-202ENST00000374339 PCDHB8Q9UN66 801 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 INPP5FQ9Y2H2 1132 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 SCN1AP35498 2009 aa10.35□□□□□ -0.75
PTPN20-202ENST00000374339 DDX3XO00571 662 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPN20-202ENST00000374339 PODXLO00592 558 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 PJA2O43164 708 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 THAP12O43422 761 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 RTN2O75298 545 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 CILPO75339 1184 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 TACC1O75410 805 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 LSM8O95777 96 aaKnown RBP10.34□□□□□ -0.75
PTPN20-202ENST00000374339 POMCP01189 267 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 MMEP08473 750 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 H2AFZP0C0S5 128 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 RAG1P15918 1043 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 IBSPP21815 317 aaPredicted RBP10.34□□□□□ -0.75
PTPN20-202ENST00000374339 FMO1Q01740 532 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 RNASELQ05823 741 aaKnown RBP10.34□□□□□ -0.75
PTPN20-202ENST00000374339 TAF3Q5VWG9 929 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 H2AFVQ71UI9 128 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 DEFB128Q7Z7B8 93 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 UNC93AQ86WB7 457 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 NPAS4Q8IUM7 802 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 TMEM86AQ8N2M4 240 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms