RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 ANKRD54Q6NXT1 300 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 RSPO2Q6UXX9 243 aaPredicted RBP17.19■□□□□ 0.34
HDHD3-202ENST00000374180 SPATA31D4Q6ZUB0 917 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 METTL23Q86XA0 190 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 MSLNLQ96KJ4 702 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 CEP63Q96MT8 703 aa17.19■□□□□ 0.34
HDHD3-202ENST00000374180 TBC1D4O60343 1298 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 HUS1O60921 280 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 CYP11A1P05108 521 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 TRIM49P0CI25 452 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 TRIM49CP0CI26 452 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 HOXB8P17481 243 aaPredicted RBP17.18■□□□□ 0.34
HDHD3-202ENST00000374180 NLRP12P59046 1061 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 C1orf220Q5T0J3 134 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 CCDC183Q5T5S1 534 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 SLC8B1Q6J4K2 584 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 LILRA6Q6PI73 481 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 ELMSAN1Q6PJG2 1045 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 SV2AQ7L0J3 742 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 FILIP1Q7Z7B0 1213 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 ASB2Q96Q27 587 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 OXCT2Q9BYC2 517 aaPredicted RBP17.18■□□□□ 0.34
HDHD3-202ENST00000374180 DZANK1Q9NVP4 752 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 GDAP2Q9NXN4 497 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 RWDD2AQ9UIY3 292 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 CD207Q9UJ71 328 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 FBXL5Q9UKA1 691 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 SNX9Q9Y5X1 595 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 ARPP19P56211 112 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 MYL6P60660 151 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 NCOA4Q13772 614 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 ZACNQ401N2 412 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 WSCD1Q658N2 575 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 RBM43Q6ZSC3 357 aaKnown RBP17.18■□□□□ 0.34
HDHD3-202ENST00000374180 KREMEN2Q8NCW0 462 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.18■□□□□ 0.34
HDHD3-202ENST00000374180 HDAC7Q8WUI4 952 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 PLEKHA4Q9H4M7 779 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 MAN1C1Q9NR34 630 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 ARMCX3Q9UH62 379 aaPredicted RBP17.18■□□□□ 0.34
HDHD3-202ENST00000374180 DACH1Q9UI36 760 aa17.18■□□□□ 0.34
HDHD3-202ENST00000374180 STX10O60499 249 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 FGFR1OPO95684 399 aaKnown RBP17.17■□□□□ 0.34
HDHD3-202ENST00000374180 ATICP31939 592 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 GCLMP48507 274 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 MCCD1P59942 119 aaPredicted RBP17.17■□□□□ 0.34
HDHD3-202ENST00000374180 PPP3CAQ08209 521 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 PUS10Q3MIT2 529 aaKnown RBP17.17■□□□□ 0.34
HDHD3-202ENST00000374180 DPCR1Q3MIW9 517 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 CCDC40Q4G0X9 1142 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 TCERG1LQ5VWI1 586 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 SYCE2Q6PIF2 218 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 THEM5Q8N1Q8 247 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 SMRP1Q8NCR6 262 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 SYAP1Q96A49 352 aaPredicted RBP17.17■□□□□ 0.34
HDHD3-202ENST00000374180 SRRTQ9BXP5 876 aaKnown RBP17.17■□□□□ 0.34
HDHD3-202ENST00000374180 MMRN2Q9H8L6 949 aa17.17■□□□□ 0.34
HDHD3-202ENST00000374180 METTL14Q9HCE5 456 aaKnown RBP17.17■□□□□ 0.34
HDHD3-202ENST00000374180 OR6C75A6NL08 312 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 CLSTN1O94985 981 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 PTMSP20962 102 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 GTF2H1P32780 548 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 KCNQ1P51787 676 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 ROR1Q01973 937 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 WDR72Q3MJ13 1102 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 DCAF17Q5H9S7 520 aaPredicted RBP17.16■□□□□ 0.34
HDHD3-202ENST00000374180 PTCRAQ6ISU1 281 aaPredicted RBP17.16■□□□□ 0.34
HDHD3-202ENST00000374180 SASS6Q6UVJ0 657 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 C15orf39Q6ZRI6 1047 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 DPH6Q7L8W6 267 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 FRMD5Q7Z6J6 570 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 TMEM86AQ8N2M4 240 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 PDCL2Q8N4E4 241 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 TOP6BLQ8N6T0 577 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 C12orf76Q8N812 135 aaPredicted RBP17.16■□□□□ 0.34
HDHD3-202ENST00000374180 ZNF461Q8TAF7 563 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 MMS19Q96T76 1030 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 APOL5Q9BWW9 433 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 S1PR5Q9H228 398 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 TMEM8AQ9HCN3 771 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 L1RE1Q9UN81 338 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
HDHD3-202ENST00000374180 C5orf42Q9H799 3197 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 VCANP13611 3396 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 ABLIM3O94929 683 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 VNN1O95497 513 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 STAU1O95793 577 aaKnown RBP17.15■□□□□ 0.34
HDHD3-202ENST00000374180 GNA14O95837 355 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 CPB1P15086 417 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 SMAD4Q13485 552 aaKnown RBP17.15■□□□□ 0.34
HDHD3-202ENST00000374180 SGSM1Q2NKQ1 1148 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 ZNF699Q32M78 642 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 RARS2Q5T160 578 aaKnown RBP17.15■□□□□ 0.34
HDHD3-202ENST00000374180 CES5AQ6NT32 575 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 XYLT2Q9H1B5 865 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 SFXN1Q9H9B4 322 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 TMEM63CQ9P1W3 806 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 FBXW11Q9UKB1 542 aa17.15■□□□□ 0.34
HDHD3-202ENST00000374180 WDR27A2RRH5 827 aa17.14■□□□□ 0.33
HDHD3-202ENST00000374180 GRXCR2A6NFK2 248 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms