RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 CALCAP01258 141 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 CD58P19256 250 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 RPL9P32969 192 aaKnown RBP18.79■□□□□ 0.6
C9orf43-202ENST00000374165 MFAP3P55082 362 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 CYP26C1Q6V0L0 522 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 SHC3Q92529 594 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 CHP1Q99653 195 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 BCO2Q9BYV7 579 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 PRG3Q9Y2Y8 225 aaPredicted RBP18.79■□□□□ 0.6
C9orf43-202ENST00000374165 NR2E3Q9Y5X4 410 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 NT5C1B-RDH14C9J2C7 533 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 GJB5O95377 273 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 OR1G1P47890 313 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 TAF6P49848 677 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 SOWAHAQ2M3V2 549 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 TIGD5Q53EQ6 642 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 TMEM173Q86WV6 379 aaPredicted RBP18.79■□□□□ 0.6
C9orf43-202ENST00000374165 IQCDQ96DY2 449 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 FAM193BQ96PV7 902 aaPredicted RBP18.79■□□□□ 0.6
C9orf43-202ENST00000374165 CWH43Q9H720 699 aa18.79■□□□□ 0.6
C9orf43-202ENST00000374165 GFPT2O94808 682 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 PLEKP08567 350 aaPredicted RBP18.78■□□□□ 0.6
C9orf43-202ENST00000374165 BRCC3P46736 316 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 IRF2BP2Q7Z5L9 587 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 ZNF397Q8NF99 534 aaPredicted RBP18.78■□□□□ 0.6
C9orf43-202ENST00000374165 CISHQ9NSE2 258 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 HMGXB4Q9UGU5 601 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 NME7Q9Y5B8 376 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 ADGRG1Q9Y653 693 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 NRP1O14786 923 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 RFX1P22670 979 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 SOX5P35711 763 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 USP8P40818 1118 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 SLC11A1P49279 550 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 SHHQ15465 462 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 MEA1Q16626 185 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 ZNF394Q53GI3 561 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 UBR7Q8N806 425 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 DDX27Q96GQ7 796 aaKnown RBP18.78■□□□□ 0.6
C9orf43-202ENST00000374165 MRPL45Q9BRJ2 306 aaKnown RBP18.78■□□□□ 0.6
C9orf43-202ENST00000374165 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
C9orf43-202ENST00000374165 GDAP2Q9NXN4 497 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 SLC4A7Q9Y6M7 1214 aa18.78■□□□□ 0.6
C9orf43-202ENST00000374165 CYP26A1O43174 497 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 HCRTO43612 131 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 CCDC175P0C221 793 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 TBXAS1P24557 533 aaPredicted RBP18.77■□□□□ 0.6
C9orf43-202ENST00000374165 HNRNPH3P31942 346 aaKnown RBP18.77■□□□□ 0.6
C9orf43-202ENST00000374165 PNPLA4P41247 253 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 TNNC1P63316 161 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 ORC1Q13415 861 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 TSR1Q2NL82 804 aaKnown RBP18.77■□□□□ 0.6
C9orf43-202ENST00000374165 RASIP1Q5U651 963 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 DCLRE1AQ6PJP8 1040 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 FAM71AQ8IYT1 594 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 LRRC43Q8N309 656 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 ZNF592Q92610 1267 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 ZNF560Q96MR9 790 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 MRPL9Q9BYD2 267 aaKnown RBP18.77■□□□□ 0.6
C9orf43-202ENST00000374165 AIPL1Q9NZN9 384 aa18.77■□□□□ 0.6
C9orf43-202ENST00000374165 TIMM13Q9Y5L4 95 aaPredicted RBP18.77■□□□□ 0.6
C9orf43-202ENST00000374165 GALTP07902 379 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 AARSP49588 968 aaKnown RBP eCLIP18.76■□□□□ 0.59
C9orf43-202ENST00000374165 SV2CQ496J9 727 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 SFMBT2Q5VUG0 894 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 HGSNATQ68CP4 663 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 FAM109BQ6ICB4 259 aaPredicted RBP18.76■□□□□ 0.59
C9orf43-202ENST00000374165 TMEM270Q6UE05 265 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 BCL7CQ8WUZ0 217 aaPredicted RBP18.76■□□□□ 0.59
C9orf43-202ENST00000374165 SENP8Q96LD8 212 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 UROC1Q96N76 676 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 TWNKQ96RR1 684 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 YME1L1Q96TA2 773 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 ARHGAP20Q9P2F6 1191 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 L1RE1Q9UN81 338 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 VWA8A3KMH1 1905 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 KIF2AO00139 706 aaPredicted RBP18.76■□□□□ 0.59
C9orf43-202ENST00000374165 ALDH2P05091 517 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 KRT5P13647 590 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 STAT1P42224 750 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 BCAR1P56945 870 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 BTG3Q14201 252 aaPredicted RBP18.76■□□□□ 0.59
C9orf43-202ENST00000374165 ENOSF1Q7L5Y1 443 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 SLC47A2Q86VL8 602 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 HERC6Q8IVU3 1022 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 WHAMMQ8TF30 809 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 KBTBD7Q8WVZ9 684 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 MARCH5Q9NX47 278 aa18.76■□□□□ 0.59
C9orf43-202ENST00000374165 MRPL42Q9Y6G3 142 aaKnown RBP18.76■□□□□ 0.59
C9orf43-202ENST00000374165 KIAA1671Q9BY89 1806 aa18.75■□□□□ 0.59
C9orf43-202ENST00000374165 LCHNA4D1U4 455 aa18.75■□□□□ 0.59
C9orf43-202ENST00000374165 GRXCR1A8MXD5 290 aa18.75■□□□□ 0.59
C9orf43-202ENST00000374165 H0YGN5 161 aa18.75■□□□□ 0.59
C9orf43-202ENST00000374165 CYB561D2O14569 222 aa18.75■□□□□ 0.59
C9orf43-202ENST00000374165 ATP2A2P16615 1042 aaKnown RBP18.75■□□□□ 0.59
C9orf43-202ENST00000374165 HTRA4P83105 476 aaPredicted RBP18.75■□□□□ 0.59
C9orf43-202ENST00000374165 WSCD1Q658N2 575 aa18.75■□□□□ 0.59
C9orf43-202ENST00000374165 LIMS2Q7Z4I7 341 aa18.75■□□□□ 0.59
C9orf43-202ENST00000374165 ACRBPQ8NEB7 543 aa18.75■□□□□ 0.59
C9orf43-202ENST00000374165 MYO6Q9UM54 1294 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms