RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 RPF1Q9H9Y2 349 aaKnown RBP13.52□□□□□ -0.24
TSC22D3-206ENST00000372397 VTA1Q9NP79 307 aa13.52□□□□□ -0.24
TSC22D3-206ENST00000372397 PARVAQ9NVD7 372 aa13.52□□□□□ -0.24
TSC22D3-206ENST00000372397 PRMT7Q9NVM4 692 aaPredicted RBP13.52□□□□□ -0.24
TSC22D3-206ENST00000372397 USTQ9Y2C2 406 aa13.52□□□□□ -0.24
TSC22D3-206ENST00000372397 SCINQ9Y6U3 715 aa13.52□□□□□ -0.24
TSC22D3-206ENST00000372397 HMGB1P1B2RPK0 211 aaPredicted RBP13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 ZNF286BP0CG31 522 aa13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 CETPP11597 493 aa13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 ASPAP45381 313 aa13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 GNGT1P63211 74 aa13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 RHOT1Q8IXI2 618 aa13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 TFAP2BQ92481 460 aa13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 NFKBIZQ9BYH8 718 aa13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 NXF1Q9UBU9 619 aaKnown RBP13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 POLIQ9UNA4 740 aa13.52□□□□□ -0.25
TSC22D3-206ENST00000372397 SCN4AP35499 1836 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 CCL15-CCL14A0A0B4J2E2 113 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 RBM47A0AV96 593 aaKnown RBP13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 LACTBL1A8MY62 500 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 TRIM66O15016 1216 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 IL18RAPO95256 599 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 VTNP04004 478 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 KRT19P08727 400 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 SSR1P43307 286 aaKnown RBP13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 RPL7AP62424 266 aaKnown RBP13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 CCL15Q16663 113 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 MAP1SQ66K74 1059 aaPredicted RBP13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 FOXR1Q6PIV2 292 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 KDM7AQ6ZMT4 941 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 CCDC50Q8IVM0 306 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 TMEM130Q8N3G9 435 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 WDTC1Q8N5D0 677 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 PPTC7Q8NI37 304 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 HEMGNQ9BXL5 484 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 CHST7Q9NS84 486 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 AKT3Q9Y243 479 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 IQCA1LA6NCM1 817 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 MAGEB2O15479 319 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 PSTPIP1O43586 416 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 STRNO43815 780 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 ECEL1O95672 775 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 LSM8O95777 96 aaKnown RBP13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 NFICP08651 508 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 STAG3L1P0CL83 205 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 NR1D1P20393 614 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 GBP1P32455 592 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 PMS2P54278 862 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 POU5F1BQ06416 359 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 PPP1R7Q15435 360 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 AMHR2Q16671 573 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 LINC01465Q8N7H1 131 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 TMEM35BQ8NCS4 154 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 MAIP1Q8WWC4 291 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 BRI3BPQ8WY22 251 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 ATG4AQ8WYN0 398 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 CPB2Q96IY4 423 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 C16orf70Q9BSU1 422 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 KATNBL1Q9H079 304 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 FAM107BQ9H098 131 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 BCCIPQ9P287 314 aaKnown RBP eCLIP13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 PARP2Q9UGN5 583 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 SIX4Q9UIU6 781 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 IVNS1ABPQ9Y6Y0 642 aa13.51□□□□□ -0.25
TSC22D3-206ENST00000372397 PASKQ96RG2 1323 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 TMEM191CA6NGB0 347 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 MEFVO15553 781 aaPredicted RBP13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 PPFIA4O75335 1185 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 CALB1P05937 261 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 RALAP11233 206 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 GJC1P36383 396 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 RAP1GAPP47736 663 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 GTF2A2P52657 109 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 FAM187BQ17R55 369 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 SPDYCQ5MJ68 293 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 EMC10Q5UCC4 262 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 RUFY4Q6ZNE9 571 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 KATNAL2Q8IYT4 538 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 EMID1Q96A84 441 aaPredicted RBP13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 EPB41L4BQ9H329 900 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 PDZD7Q9H5P4 517 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 LRRC4CQ9HCJ2 640 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 IP6K2Q9UHH9 426 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 SLC45A1Q9Y2W3 748 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 ZSWIM8A7E2V4 1837 aa13.5□□□□□ -0.25
TSC22D3-206ENST00000372397 H3BRB1 525 aa13.49□□□□□ -0.25
TSC22D3-206ENST00000372397 MCF2P10911 925 aa13.49□□□□□ -0.25
TSC22D3-206ENST00000372397 CDH8P55286 799 aa13.49□□□□□ -0.25
TSC22D3-206ENST00000372397 PDCLQ13371 301 aa13.49□□□□□ -0.25
TSC22D3-206ENST00000372397 SKIDA1Q1XH10 827 aa13.49□□□□□ -0.25
TSC22D3-206ENST00000372397 WDR72Q3MJ13 1102 aa13.49□□□□□ -0.25
TSC22D3-206ENST00000372397 JADE1Q6IE81 842 aa13.49□□□□□ -0.25
TSC22D3-206ENST00000372397 MTHFD1LQ6UB35 978 aa13.49□□□□□ -0.25
TSC22D3-206ENST00000372397 DPP9Q86TI2 863 aa13.49□□□□□ -0.25
TSC22D3-206ENST00000372397 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms