RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 PHF13Q86YI8 300 aaPredicted RBP21.11■□□□□ 0.97
LHX3-202ENST00000371748 PPP1R13LQ8WUF5 828 aa21.11■□□□□ 0.97
LHX3-202ENST00000371748 EBAG9O00559 213 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 PHF2O75151 1096 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 IL18RAPO95256 599 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 GNGT1P63211 74 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 PTP4A2Q12974 167 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 PRAMEF19Q5SWL8 479 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 SLC13A5Q86YT5 568 aaPredicted RBP21.1■□□□□ 0.97
LHX3-202ENST00000371748 IFNLR1Q8IU57 520 aaPredicted RBP21.1■□□□□ 0.97
LHX3-202ENST00000371748 FAM107BQ9H098 131 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 ZEB2O60315 1214 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 RAP1GAPP47736 663 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 MAMLD1Q13495 774 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 PPP2R5EQ16537 467 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 JADE1Q6IE81 842 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 MREGQ8N565 214 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 EIF1ADQ8N9N8 165 aaKnown RBP21.1■□□□□ 0.97
LHX3-202ENST00000371748 RABEP2Q9H5N1 569 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 SIX4Q9UIU6 781 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 FAM169AQ9Y6X4 670 aa21.1■□□□□ 0.97
LHX3-202ENST00000371748 MCF2P10911 925 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 C1orf127Q8N9H9 656 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 SEC14L1Q92503 715 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 MAGOHBQ96A72 148 aaKnown RBP21.09■□□□□ 0.97
LHX3-202ENST00000371748 RUFY1Q96T51 708 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 HSPA6P17066 643 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 SKOR1P84550 965 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 TNFAIP2Q03169 654 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 DGKDQ16760 1214 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 CFAP58Q5T655 872 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 CST9Q5W186 159 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 TTC19Q6DKK2 380 aaPredicted RBP21.09■□□□□ 0.97
LHX3-202ENST00000371748 C1orf131Q8NDD1 294 aaKnown RBP21.09■□□□□ 0.97
LHX3-202ENST00000371748 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.09■□□□□ 0.97
LHX3-202ENST00000371748 VCPIP1Q96JH7 1222 aa21.09■□□□□ 0.97
LHX3-202ENST00000371748 FGFR4P22455 802 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 FLT3P36888 993 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 IQSEC1Q6DN90 963 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 PLEKHA7Q6IQ23 1121 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 TTC27Q6P3X3 843 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 JAMLQ86YT9 394 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 PLCD3Q8N3E9 789 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 PIK3R5Q8WYR1 880 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 TFAP2BQ92481 460 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 SETD4Q9NVD3 440 aa21.08■□□□□ 0.97
LHX3-202ENST00000371748 SLC15A5A6NIM6 579 aa21.08■□□□□ 0.96
LHX3-202ENST00000371748 PROSCO94903 275 aa21.08■□□□□ 0.96
LHX3-202ENST00000371748 ITGB3P05106 788 aa21.08■□□□□ 0.96
LHX3-202ENST00000371748 HOXD8P13378 290 aaPredicted RBP21.08■□□□□ 0.96
LHX3-202ENST00000371748 CHRNA3P32297 505 aa21.08■□□□□ 0.96
LHX3-202ENST00000371748 C1QBPQ07021 282 aaKnown RBP21.08■□□□□ 0.96
LHX3-202ENST00000371748 TMEM62Q0P6H9 643 aa21.08■□□□□ 0.96
LHX3-202ENST00000371748 WDR72Q3MJ13 1102 aa21.08■□□□□ 0.96
LHX3-202ENST00000371748 KIAA0319LQ8IZA0 1049 aa21.08■□□□□ 0.96
LHX3-202ENST00000371748 IQCKQ8N0W5 287 aa21.08■□□□□ 0.96
LHX3-202ENST00000371748 RAB17Q9H0T7 212 aa21.08■□□□□ 0.96
LHX3-202ENST00000371748 MRPL47Q9HD33 250 aaKnown RBP21.08■□□□□ 0.96
LHX3-202ENST00000371748 O00370 1275 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 DYNC1LI2O43237 492 aaPredicted RBP21.07■□□□□ 0.96
LHX3-202ENST00000371748 TSPAN1O60635 241 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 RARAP10276 462 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 MMP8P22894 467 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 HSPA9P38646 679 aaKnown RBP21.07■□□□□ 0.96
LHX3-202ENST00000371748 SLC1A1P43005 524 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 CDH8P55286 799 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 HUNKP57058 714 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 DHX34Q14147 1143 aaKnown RBP21.07■□□□□ 0.96
LHX3-202ENST00000371748 SIX1Q15475 284 aaPredicted RBP21.07■□□□□ 0.96
LHX3-202ENST00000371748 MICALL1Q8N3F8 863 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 ERP44Q9BS26 406 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 FAM114A2Q9NRY5 505 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 TLR3O15455 904 aaKnown RBP21.07■□□□□ 0.96
LHX3-202ENST00000371748 ERLIN2O94905 339 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 PTGIRP43119 386 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 SLC10A6Q3KNW5 377 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 ZNF667Q5HYK9 610 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 CCDC137Q6PK04 289 aaKnown RBP21.07■□□□□ 0.96
LHX3-202ENST00000371748 LENG1Q96BZ8 264 aaPredicted RBP21.07■□□□□ 0.96
LHX3-202ENST00000371748 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.07■□□□□ 0.96
LHX3-202ENST00000371748 GINS2Q9Y248 185 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 SCINQ9Y6U3 715 aa21.07■□□□□ 0.96
LHX3-202ENST00000371748 CITO14578 2027 aa21.06■□□□□ 0.96
LHX3-202ENST00000371748 KRT14P02533 472 aa21.06■□□□□ 0.96
LHX3-202ENST00000371748 ORC1Q13415 861 aa21.06■□□□□ 0.96
LHX3-202ENST00000371748 KIZQ2M2Z5 673 aa21.06■□□□□ 0.96
LHX3-202ENST00000371748 DUPD1Q68J44 220 aa21.06■□□□□ 0.96
LHX3-202ENST00000371748 MTUS1Q9ULD2 1270 aa21.06■□□□□ 0.96
LHX3-202ENST00000371748 USTQ9Y2C2 406 aa21.06■□□□□ 0.96
LHX3-202ENST00000371748 FAM187AA6NFU0 413 aa21.05■□□□□ 0.96
LHX3-202ENST00000371748 IGF2BP3O00425 579 aaKnown RBP eCLIP21.05■□□□□ 0.96
LHX3-202ENST00000371748 RPL7AP62424 266 aaKnown RBP21.05■□□□□ 0.96
LHX3-202ENST00000371748 WDTC1Q8N5D0 677 aa21.05■□□□□ 0.96
LHX3-202ENST00000371748 DDX27Q96GQ7 796 aaKnown RBP21.05■□□□□ 0.96
LHX3-202ENST00000371748 FAM49AQ9H0Q0 323 aaPredicted RBP21.05■□□□□ 0.96
LHX3-202ENST00000371748 SDCBP2Q9H190 292 aa21.05■□□□□ 0.96
LHX3-202ENST00000371748 PARVAQ9NVD7 372 aa21.05■□□□□ 0.96
LHX3-202ENST00000371748 FLRT1Q9NZU1 646 aa21.05■□□□□ 0.96
LHX3-202ENST00000371748 TRIP11Q15643 1979 aa21.05■□□□□ 0.96
LHX3-202ENST00000371748 CD19P15391 556 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms