RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 MREGQ8N565 214 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 DYDC1Q8WWB3 177 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
PDE6C-201ENST00000371447 LENG1Q96BZ8 264 aaPredicted RBP12.47□□□□□ -0.41
PDE6C-201ENST00000371447 COL11A1P12107 1806 aaPredicted RBP12.47□□□□□ -0.41
PDE6C-201ENST00000371447 FAM187AA6NFU0 413 aa12.46□□□□□ -0.41
PDE6C-201ENST00000371447 GPR25O00155 361 aa12.46□□□□□ -0.41
PDE6C-201ENST00000371447 OGTO15294 1046 aa12.46□□□□□ -0.41
PDE6C-201ENST00000371447 RGS7P49802 495 aa12.46□□□□□ -0.41
PDE6C-201ENST00000371447 KIZQ2M2Z5 673 aa12.46□□□□□ -0.41
PDE6C-201ENST00000371447 THOC1Q96FV9 657 aaKnown RBP12.46□□□□□ -0.41
PDE6C-201ENST00000371447 NIFKQ9BYG3 293 aaKnown RBP12.46□□□□□ -0.41
PDE6C-201ENST00000371447 PABPC3Q9H361 631 aaKnown RBP12.46□□□□□ -0.41
PDE6C-201ENST00000371447 SMYD3Q9H7B4 428 aa12.46□□□□□ -0.41
PDE6C-201ENST00000371447 RPF1Q9H9Y2 349 aaKnown RBP12.46□□□□□ -0.41
PDE6C-201ENST00000371447 ANAPC5Q9UJX4 755 aa12.46□□□□□ -0.41
PDE6C-201ENST00000371447 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
PDE6C-201ENST00000371447 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.46□□□□□ -0.42
PDE6C-201ENST00000371447 H0YHG0 523 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 CNMDO75829 334 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 ATG7O95352 703 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 YBX3P16989 372 aaKnown RBP eCLIP12.46□□□□□ -0.42
PDE6C-201ENST00000371447 RFC5P40937 340 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 PPP2R2AP63151 447 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 PTGISQ16647 500 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 MFSD7Q6UXD7 560 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 KDM7AQ6ZMT4 941 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 MON1BQ7L1V2 547 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 ENOSF1Q7L5Y1 443 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 DPP9Q86TI2 863 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 NLRP14Q86W24 1093 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 HSPH1Q92598 858 aa12.46□□□□□ -0.42
PDE6C-201ENST00000371447 SOCS7O14512 581 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 BANF1O75531 89 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 PROSCO94903 275 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 VIMP08670 466 aaKnown RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 OGDHQ02218 1023 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 GRM1Q13255 1194 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 TARBP2Q15633 366 aaKnown RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 QPCTQ16769 361 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 IER5Q5VY09 327 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 ARMCX2Q7L311 632 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 BRSK2Q8IWQ3 736 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 GDAP1Q8TB36 358 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 FEZF2Q8TBJ5 459 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 RAPGEF5Q92565 580 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 HEXIM2Q96MH2 286 aaKnown RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 PODXLO00592 558 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 RASGRF2O14827 1237 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 KIAA0754O94854 1291 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 GAS8O95995 478 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 ICAM3P32942 547 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 RTP1P59025 263 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 SIX1Q15475 284 aaPredicted RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 SH3D19Q5HYK7 790 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 RHOT1Q8IXI2 618 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 ZNF473Q8WTR7 871 aaKnown RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 DDX27Q96GQ7 796 aaKnown RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 LPIN3Q9BQK8 851 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 TMEM121Q9BTD3 319 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 CXCL16Q9H2A7 254 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 CDC42EP4Q9H3Q1 356 aaKnown RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 MRPL47Q9HD33 250 aaKnown RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 DNPEPQ9ULA0 475 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 LACTBL1A8MY62 500 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 CHN1P15882 459 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 OSBPP22059 807 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 PSMA2P25787 234 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 EPHX2P34913 555 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 RFC1P35251 1148 aaPredicted RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 PSMC1P62191 440 aaKnown RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 CENPCQ03188 943 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 TTLL4Q14679 1199 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 P3H1Q32P28 736 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 NOL9Q5SY16 702 aaKnown RBP12.45□□□□□ -0.42
PDE6C-201ENST00000371447 SCYL2Q6P3W7 929 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 JOSD2Q8TAC2 188 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 TWNKQ96RR1 684 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 CALN1Q9BXU9 219 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 NIF3L1Q9GZT8 377 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 AGAP1Q9UPQ3 857 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 CEP83Q9Y592 693 aa12.45□□□□□ -0.42
PDE6C-201ENST00000371447 A0A0G2JLL6 359 aaPredicted RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 ZBTB42B2RXF5 422 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 POC1B-GALNT4F8VUJ3 575 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 SGK1O00141 431 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 ASS1P00966 412 aaKnown RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 ADORA2AP29274 412 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 TAF5Q15542 800 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 ZKSCAN8Q15776 578 aaPredicted RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 ZNF667Q5HYK9 610 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 JADE1Q6IE81 842 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 PRRT2Q7Z6L0 340 aaPredicted RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 C7orf31Q8N865 590 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 C12orf29Q8N999 325 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 FGD4Q96M96 766 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms