RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CHMP2AO43633 222 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 SLITRK3O94933 977 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CBX7O95931 251 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 KRT18P05783 430 aaKnown RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 NME1P15531 152 aaKnown RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 PTGS1P23219 599 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 AFMP43652 599 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 PRKCQQ04759 706 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 ITKQ08881 620 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CTTNQ14247 550 aaKnown RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 EPHA7Q15375 998 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 SEPT7Q16181 437 aaKnown RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 CCL14Q16627 93 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 LY6KQ17RY6 165 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 TAPT1Q6NXT6 567 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 LETMD1Q6P1Q0 360 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CCDC62Q6P9F0 684 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 ARMCX2Q7L311 632 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 DPP9Q86TI2 863 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 FBXO16Q8IX29 292 aaPredicted RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 SPACA3Q8IXA5 215 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 ELOA2Q8IYF1 753 aaPredicted RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 CNNM3Q8NE01 707 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 COPS5Q92905 334 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 SYAP1Q96A49 352 aaPredicted RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 DYDC2Q96IM9 177 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 EIF2AK1Q9BQI3 630 aaKnown RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 YIPF4Q9BSR8 244 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 POLR3CQ9BUI4 534 aaPredicted RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 RAB34Q9BZG1 259 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 CDH19Q9H159 772 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 TBC1D22BQ9NU19 505 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 FAM86C1Q9NVL1 165 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 WRAP73Q9P2S5 460 aaPredicted RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 REV1Q9UBZ9 1251 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 TJP2Q9UDY2 1190 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 GABRQQ9UN88 632 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 DIS3Q9Y2L1 958 aaKnown RBP3.94□□□□□ -1.78
MCF2-202ENST00000370573 COMMD10Q9Y6G5 202 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 DOCK5Q9H7D0 1870 aa3.94□□□□□ -1.78
MCF2-202ENST00000370573 TMEM265A0A087WTH1 108 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 GSTTP1A0A1W2PQM5 241 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 CTAGE5O15320 804 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 DNAJC8O75937 253 aaPredicted RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 LETM1O95202 739 aaPredicted RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 HOXC6P09630 235 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 CYP2B6P20813 491 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 UBA1P22314 1058 aaKnown RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 RPA1P27694 616 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 POLR2BP30876 1174 aaKnown RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 STAT6P42226 847 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 PSMC4P43686 418 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 SARSP49591 514 aaKnown RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 LACTBP83111 547 aaPredicted RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 CYP4A11Q02928 519 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 CUL4BQ13620 913 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 DHX8Q14562 1220 aaKnown RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 ZNF460Q14592 562 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 POSTNQ15063 836 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 UGCGQ16739 394 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 GNPTABQ3T906 1256 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 FNDC3BQ53EP0 1204 aaKnown RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 PRAMEF19Q5SWL8 479 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 PKN3Q6P5Z2 889 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 LRSAM1Q6UWE0 723 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 MIER3Q7Z3K6 550 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 TAB3Q8N5C8 712 aaPredicted RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 COG1Q8WTW3 980 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 RAD54LQ92698 747 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 CALML4Q96GE6 196 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 SENP7Q9BQF6 1050 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 BLZF1Q9H2G9 400 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 USP25Q9UHP3 1055 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 TUBE1Q9UJT0 475 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 RNF114Q9Y508 228 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 PCDHA5Q9Y5H7 936 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 NFASCO94856 1347 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 CEP350Q5VT06 3117 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 MYMKA6NI61 221 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 B4DLN1 442 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 BIN1O00499 593 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 TNPO2O14787 897 aaKnown RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 PAX4O43316 350 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 SLC26A4O43511 780 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 KLRC4O43908 158 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 STBD1O95210 358 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 TXNP10599 105 aaKnown RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 ACTR2P61160 394 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 SP4Q02446 784 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 SP3Q02447 781 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 NCAPHQ15003 741 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 GJC2Q5T442 439 aaPredicted RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 C10orf62Q5T681 223 aaPredicted RBP3.93□□□□□ -1.78
MCF2-202ENST00000370573 ISM2Q6H9L7 571 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 ABHD15Q6UXT9 468 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 CBLL1Q75N03 491 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 TPH2Q8IWU9 490 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 CEP57L1Q8IYX8 460 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 RASSF8Q8NHQ8 419 aa3.93□□□□□ -1.78
MCF2-202ENST00000370573 ERMNQ8TAM6 284 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms