RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ACER1Q8TDN7 264 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 TMA16Q96EY4 203 aaKnown RBP8.96□□□□□ -0.98
ABCA4-201ENST00000370225 PRMT1Q99873 361 aaKnown RBP8.96□□□□□ -0.98
ABCA4-201ENST00000370225 PCMTD2Q9NV79 361 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 PDHA1P08559 390 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 FAM200BP0CF97 657 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 RALBP11234 206 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 CLCN3P51790 818 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 UBE3AQ05086 875 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 MTBPQ96DY7 904 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 CATSPERBQ9H7T0 1116 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 GPRC5CQ9NQ84 441 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 SPATA31A5Q5VU36 1347 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 SPATA31A7Q8IWB4 1347 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 PCSK1P29120 753 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 SF3B3Q15393 1217 aaKnown RBP8.96□□□□□ -0.98
ABCA4-201ENST00000370225 PATL1Q86TB9 770 aaKnown RBP8.96□□□□□ -0.98
ABCA4-201ENST00000370225 IGDCC4Q8TDY8 1250 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 VMP1Q96GC9 406 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 IL1RL2Q9HB29 575 aa8.96□□□□□ -0.98
ABCA4-201ENST00000370225 EPB41L4AQ9HCS5 686 aaPredicted RBP8.96□□□□□ -0.98
ABCA4-201ENST00000370225 ZNF263O14978 683 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 HAUS5O94927 633 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 TMED8Q6PL24 325 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 METTL16Q86W50 562 aaKnown RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 KCTD17Q8N5Z5 321 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 SCFD1Q8WVM8 642 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 TRIM9Q9C026 710 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 POLLQ9UGP5 575 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 ZNF521Q96K83 1311 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 CASTOR2A6NHX0 329 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 EXTL3O43909 919 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 ENO1P06733 434 aaKnown RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 PDIA5Q14554 519 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 DMC1Q14565 340 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 LONRF1Q17RB8 773 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 CCDC144BQ3MJ40 725 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 OTUB1Q96FW1 271 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 COLEC11Q9BWP8 271 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 ECT2Q9H8V3 914 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 STARD7Q9NQZ5 370 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 SMARCAL1Q9NZC9 954 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 TRIM10Q9UDY6 481 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 V9GYQ6 96 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 C1orf167Q5SNV9 1468 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 NCF1BA6NI72 391 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 NCF1CA8MVU1 366 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 SLC16A3O15427 465 aaKnown RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 NCF1P14598 390 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 KDSRQ06136 332 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 SGMS1Q86VZ5 419 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 CACUL1Q86Y37 369 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 SHCBP1Q8NEM2 672 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 KAT2BQ92831 832 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 AKT1S1Q96B36 256 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 LRRC37BQ96QE4 947 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 ADARB2Q9NS39 739 aaKnown RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 SNX5Q9Y5X3 404 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 FHOD1Q9Y613 1164 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 ANGPT2O15123 496 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 DDNO94850 711 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 SKIP12755 728 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 RCAN1P53805 252 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 MAP1SQ66K74 1059 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 GTF3C2Q8WUA4 911 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 TAF1DQ9H5J8 278 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 GBA2Q9HCG7 927 aaPredicted RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 ZC3H7BQ9UGR2 993 aaKnown RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 CHMP2BQ9UQN3 213 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 RRN3P2A6NIE6 340 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 RPS12P25398 132 aaKnown RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 PRKCQQ04759 706 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 TIPINQ9BVW5 301 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 ADGRB3O60242 1522 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 PMPCBO75439 489 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 ASS1P00966 412 aaKnown RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 GPD1P21695 349 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 CAPZA2P47755 286 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 TAF6P49848 677 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 C2CD6Q53TS8 623 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 BLOC1S5Q8TDH9 187 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 CALR3Q96L12 384 aaKnown RBP8.95□□□□□ -0.98
ABCA4-201ENST00000370225 PNKPQ96T60 521 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 CHP1Q99653 195 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 STK33Q9BYT3 514 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 BRD8Q9H0E9 1235 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 WDCPQ9H6R7 721 aa8.95□□□□□ -0.98
ABCA4-201ENST00000370225 GPR182O15218 404 aa8.94□□□□□ -0.98
ABCA4-201ENST00000370225 NDUFB5O43674 189 aa8.94□□□□□ -0.98
ABCA4-201ENST00000370225 STAG3L1P0CL83 205 aa8.94□□□□□ -0.98
ABCA4-201ENST00000370225 PNMA6AP0CW24 399 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-201ENST00000370225 MYL4P12829 197 aa8.94□□□□□ -0.98
ABCA4-201ENST00000370225 SLC9A1P19634 815 aa8.94□□□□□ -0.98
ABCA4-201ENST00000370225 CEP70Q8NHQ1 597 aa8.94□□□□□ -0.98
ABCA4-201ENST00000370225 SPATA18Q8TC71 538 aa8.94□□□□□ -0.98
ABCA4-201ENST00000370225 SYTL2Q9HCH5 934 aa8.94□□□□□ -0.98
ABCA4-201ENST00000370225 AGPAT5Q9NUQ2 364 aa8.94□□□□□ -0.98
ABCA4-201ENST00000370225 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.94□□□□□ -0.98
ABCA4-201ENST00000370225 DBR1Q9UK59 544 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms