RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 PHF12Q96QT6 1004 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 PLVAPQ9BX97 442 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 TMEM39BQ9GZU3 492 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 DENND3A2RUS2 1198 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 MAGEA13PA6NCF6 341 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 PSMC4P43686 418 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 RTP1P59025 263 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 SPDYCQ5MJ68 293 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 GSTA5Q7RTV2 222 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 CYP4X1Q8N118 509 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 KCTD17Q8N5Z5 321 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 GZMAP12544 262 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 BRAFP15056 766 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 GBP7Q8N8V2 638 aaPredicted RBP16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 PTPRN2Q92932 1015 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 RIT2Q99578 217 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 IQCGQ9H095 443 aaKnown RBP16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 RAVER2Q9HCJ3 691 aaKnown RBP16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 KLHL11Q9NVR0 708 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 ANAPC5Q9UJX4 755 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 GTF3C4Q9UKN8 822 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 LRCH1Q9Y2L9 728 aa16.88■□□□□ 0.29
SYNCRIP-202ENST00000369622 H0YIN7 160 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 ENTPD3O75355 529 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 GGPS1O95749 300 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 SKIP12755 728 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 ADSSP30520 456 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 RNF168Q8IYW5 571 aaPredicted RBP16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 CD101Q93033 1021 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 CLMNQ96JQ2 1002 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 STRA6Q9BX79 667 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 RAB20Q9NX57 234 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 TDRKHQ9Y2W6 561 aaKnown RBP16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 O00370 1275 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 ABLIM1O14639 778 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 OAS1P00973 400 aaKnown RBP16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 ATF2P15336 505 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 RRM1P23921 792 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 STX2P32856 288 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 CDR2Q01850 454 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 SPP2Q13103 211 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 SLC27A3Q5K4L6 730 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 KAZNQ674X7 775 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 FBXL13Q8NEE6 735 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 TGS1Q96RS0 853 aaKnown RBP16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 HERPUD2Q9BSE4 406 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 RANBP17Q9H2T7 1088 aaKnown RBP16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 FOCADQ5VW36 1801 aa16.87■□□□□ 0.29
SYNCRIP-202ENST00000369622 CAPN9O14815 690 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 HADHBP55084 474 aaKnown RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 SFSWAPQ12872 951 aaKnown RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 SIX1Q15475 284 aaPredicted RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 TKFCQ3LXA3 575 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 SHC3Q92529 594 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 TUBGCP5Q96RT8 1024 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 FAM213AQ9BRX8 229 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 R3HDM2Q9Y2K5 976 aaKnown RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 HNRNPDLO14979 420 aaKnown RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 ZNF24P17028 368 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 DLGAP5Q15398 846 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 CGB2Q6NT52 195 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 DSTYKQ6XUX3 929 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 SV2AQ7L0J3 742 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 CYFIP1Q7L576 1253 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 RIBC1Q8N443 379 aaPredicted RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 SPATA16Q9BXB7 569 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 KMT5AQ9NQR1 393 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 CTDP1Q9Y5B0 961 aaPredicted RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 UTRNP46939 3433 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 GJB6O95452 261 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 GAS8O95995 478 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 SERPINB3P29508 390 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 VHLP40337 213 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 PLOD1Q02809 727 aaPredicted RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 ACAD10Q6JQN1 1059 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 DUS1LQ6P1R4 473 aaKnown RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 CROCCP2Q86T23 111 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 SPOCK2Q92563 424 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 ZNF341Q9BYN7 854 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 AAASQ9NRG9 546 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 ARHGEF38Q9NXL2 777 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 CLIC5Q9NZA1 410 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 HERC5Q9UII4 1024 aaKnown RBP16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 TAF1LQ8IZX4 1826 aa16.86■□□□□ 0.29
SYNCRIP-202ENST00000369622 P4HA2O15460 535 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 OR6B1O95007 311 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 CYP1A2P05177 515 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 RALAP11233 206 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 CD58P19256 250 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 DMP1Q13316 513 aaPredicted RBP16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 KBTBD12Q3ZCT8 623 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 KBTBD2Q8IY47 623 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 HELQQ8TDG4 1101 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 TAAR1Q96RJ0 339 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 SLX1AQ9BQ83 275 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 UVRAGQ9P2Y5 699 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 TBX20Q9UMR3 447 aa16.85■□□□□ 0.29
SYNCRIP-202ENST00000369622 C10orf71Q711Q0 1435 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms