RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 EIF2AQ9BY44 585 aaKnown RBP4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 SIK2Q9H0K1 926 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 MEGF9Q9H1U4 602 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 HDAC5Q9UQL6 1122 aa4.53□□□□□ -1.68
RNU6-28P-201ENST00000362378 CCDC189A1A4V9 331 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZNF785A8K8V0 405 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 PYCARD-AS1I3L0S3 204 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 THAP12O43422 761 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 AGFG2O95081 481 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 GRPP07492 148 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 PIM1P11309 404 aaPredicted RBP4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 IL1R1P14778 569 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 GNAT2P19087 354 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 FDXRP22570 491 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 EEF1GP26641 437 aaKnown RBP4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 KLRC1P26715 233 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 SLC11A2P49281 568 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZNF135P52742 658 aaPredicted RBP4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 MAPK10P53779 464 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 PSMC1P62191 440 aaKnown RBP4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 TRIM14Q14142 442 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 CRB2Q5IJ48 1285 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 EFCAB12Q6NXP0 572 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 PGBD2Q6P3X8 592 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 TLDC1Q6P9B6 456 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 PPP1R32Q7Z5V6 425 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 TAX1BP1Q86VP1 789 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 SP8Q8IXZ3 490 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 FANCBQ8NB91 859 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 TMIEQ8NEW7 156 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 MDGA1Q8NFP4 955 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 OR52N2Q8NGI0 321 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 ST8SIA2Q92186 375 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 EVI5LQ96CN4 794 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 KLHL32Q96NJ5 620 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 LRRC37BQ96QE4 947 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 MPHOSPH9Q99550 1183 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 CPPED1Q9BRF8 314 aaPredicted RBP4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 STK33Q9BYT3 514 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 CPEB1Q9BZB8 566 aaKnown RBP4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 TINAGL1Q9GZM7 467 aaPredicted RBP4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 CHST8Q9H2A9 424 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 AGO4Q9HCK5 861 aaKnown RBP4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 PLA2G3Q9NZ20 509 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 LUZP4Q9P127 313 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 AGAP1Q9UPQ3 857 aa4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 MORC2Q9Y6X9 1032 aaPredicted RBP4.52□□□□□ -1.69
RNU6-28P-201ENST00000362378 hCG_1642624A0A1W2PR95 340 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 CDHR4A6H8M9 788 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 DRGXA6NNA5 263 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 E9PLN8 166 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 HNRNPDLO14979 420 aaKnown RBP4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 FFAR2O15552 330 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 LAMTOR5O43504 91 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 IPO13O94829 963 aaKnown RBP4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 TXNP10599 105 aaKnown RBP4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 SLC6A2P23975 617 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 MGAT1P26572 445 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 GRK6P43250 576 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 PTTG1IPP53801 180 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 UCP3P55916 312 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 WNT3P56703 355 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 ICA1Q05084 483 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 PUM3Q15397 648 aaKnown RBP4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 PKN1Q16512 942 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 AMOTQ4VCS5 1084 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 CCDC174Q6PII3 467 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 UNC13DQ70J99 1090 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZFPM1Q8IX07 1006 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 SLC15A4Q8N697 577 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 PCSK9Q8NBP7 692 aaKnown RBP4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 OR56A3Q8NH54 315 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 CYP2W1Q8TAV3 490 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 TBC1D15Q8TC07 691 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 ZNF566Q969W8 418 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 VKORC1Q9BQB6 163 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 SPATA5L1Q9BVQ7 753 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 GJB4Q9NTQ9 266 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 XPR1Q9UBH6 696 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 TMX2Q9Y320 296 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 SH3BP1Q9Y3L3 701 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 CEP83Q9Y592 693 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 SLC30A1Q9Y6M5 507 aa4.51□□□□□ -1.69
RNU6-28P-201ENST00000362378 GOLGA6L3A6NEY3 463 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 TMEM233B4DJY2 109 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 MFAP3LO75121 409 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 RAD17O75943 681 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 CKBP12277 381 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 MYL4P12829 197 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 GCSHP23434 173 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 CHKAP35790 457 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 ALDH9A1P49189 494 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 CARSP49589 748 aaKnown RBP4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 BLMHQ13867 455 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 STARD3Q14849 445 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 DCAF17Q5H9S7 520 aaPredicted RBP4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 DCAF12L1Q5VU92 463 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 FAM160B1Q5W0V3 765 aa4.5□□□□□ -1.69
RNU6-28P-201ENST00000362378 MED25Q71SY5 747 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms