RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 SENP8Q96LD8 212 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 BCO2Q9BYV7 579 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 NIF3L1Q9GZT8 377 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 INSL6Q9Y581 213 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 VWA8A3KMH1 1905 aa11.54□□□□□ -0.56
SNX6-201ENST00000362031 CYB561D2O14569 222 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 EFEMP2O95967 443 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 LMO2P25791 158 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 WSCD1Q658N2 575 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 OSTM1Q86WC4 334 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 DRC7Q8IY82 874 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 PDCL2Q8N4E4 241 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 TC2NQ8N9U0 490 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
SNX6-201ENST00000362031 MMS19Q96T76 1030 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 GDAP2Q9NXN4 497 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 CAPN11Q9UMQ6 739 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 FAN1Q9Y2M0 1017 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 MYO9BQ13459 2157 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 LINC01553A4QN01 128 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 LRRC53A6NM62 1247 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 F8VZ95 297 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 CA3P07451 260 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 GCNT1Q02742 428 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 MYO1EQ12965 1108 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 ZNF394Q53GI3 561 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 FIGNQ5HY92 759 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 SPOUT1Q5T280 376 aaKnown RBP11.53□□□□□ -0.56
SNX6-201ENST00000362031 KIAA0319Q5VV43 1072 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 FIBCD1Q8N539 461 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 COLGALT1Q8NBJ5 622 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 RSPH1Q8WYR4 309 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 TAF4BQ92750 862 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 CLP1Q92989 425 aaKnown RBP11.53□□□□□ -0.56
SNX6-201ENST00000362031 UROC1Q96N76 676 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 RTP3Q9BQQ7 232 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 C17orf80Q9BSJ5 609 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 PBX4Q9BYU1 374 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 CISHQ9NSE2 258 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
SNX6-201ENST00000362031 CEP72Q9P209 647 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 ADAM28Q9UKQ2 775 aa11.53□□□□□ -0.56
SNX6-201ENST00000362031 TMEM189-UBE2V1I3L0A0 370 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 M0QZQ0 153 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 TADA2AO75478 443 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 TKTP29401 623 aaKnown RBP11.52□□□□□ -0.56
SNX6-201ENST00000362031 CLCN1P35523 988 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 ALDH7A1P49419 539 aaKnown RBP11.52□□□□□ -0.56
SNX6-201ENST00000362031 ARID5AQ03989 594 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 SV2CQ496J9 727 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 WDR59Q6PJI9 974 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 CCDC186Q7Z3E2 898 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.52□□□□□ -0.56
SNX6-201ENST00000362031 SLC39A11Q8N1S5 342 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 SHC3Q92529 594 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 IGSF21Q96ID5 467 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 ZNF560Q96MR9 790 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 ZSWIM1Q9BR11 485 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 TMEM175Q9BSA9 504 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 STK33Q9BYT3 514 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 IMPG2Q9BZV3 1241 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 ELOVL4Q9GZR5 314 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 ZMYND15Q9H091 742 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 DPEP3Q9H4B8 488 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 FBXL5Q9UKA1 691 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 MTUS1Q9ULD2 1270 aa11.52□□□□□ -0.56
SNX6-201ENST00000362031 FAM170AA1A519 330 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 MFAP3LO75121 409 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 BMP8BP34820 402 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 KRT9P35527 623 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 PNPLA4P41247 253 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 TNNC1P63316 161 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 MLLT1Q03111 559 aaPredicted RBP11.52□□□□□ -0.57
SNX6-201ENST00000362031 RTP2Q5QGT7 225 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 PDXDC1Q6P996 788 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 DSTYKQ6XUX3 929 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 OLIG1Q8TAK6 271 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 SUSD3Q96L08 255 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 TMEM209Q96SK2 561 aa11.52□□□□□ -0.57
SNX6-201ENST00000362031 MTIF3Q9H2K0 278 aaKnown RBP11.52□□□□□ -0.57
SNX6-201ENST00000362031 R3HCC1Q9Y3T6 440 aaKnown RBP11.52□□□□□ -0.57
SNX6-201ENST00000362031 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.52□□□□□ -0.572e-6■■■■□ 19.3
SNX6-201ENST00000362031 UNC80Q8N2C7 3258 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 C5orf42Q9H799 3197 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 A0A1W2PQJ5 194 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 CYP26A1O43174 497 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 ATP2C2O75185 946 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 GFPT2O94808 682 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 PLEKP08567 350 aaPredicted RBP11.51□□□□□ -0.57
SNX6-201ENST00000362031 CFHP08603 1231 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 PDGFRBP09619 1106 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 SKILP12757 684 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 ACAT1P24752 427 aaKnown RBP11.51□□□□□ -0.57
SNX6-201ENST00000362031 DNAJB1P25685 340 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 USP8P40818 1118 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 NDST1P52848 882 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 MFAP3P55082 362 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 FAM171A1Q5VUB5 890 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 FUT10Q6P4F1 479 aa11.51□□□□□ -0.57
SNX6-201ENST00000362031 TMEM270Q6UE05 265 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms