RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 NYAP2Q9P242 653 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 RRN3P2A6NIE6 340 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 CYB561D2O14569 222 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 PCDH8O95206 1070 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 CAP2P40123 477 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 CASP4P49662 377 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 MTF1Q14872 753 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 SHCBP1Q8NEM2 672 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 MTMR12Q9C0I1 747 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 KCNQ5Q9NR82 932 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 VGLL3A8MV65 326 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 AKAP5P24588 427 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 GCKP35557 465 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 USP10Q14694 798 aaKnown RBP21.27■■□□□ 1
CDC42BPB-201ENST00000361246 M0QYT0 321 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 VEGFAP15692 232 aaPredicted RBP21.27■■□□□ 1
CDC42BPB-201ENST00000361246 ASPSCR1Q9BZE9 553 aa21.27■■□□□ 1
CDC42BPB-201ENST00000361246 DIS3Q9Y2L1 958 aaKnown RBP21.27■■□□□ 1
CDC42BPB-201ENST00000361246 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.27■□□□□ 0.99
CDC42BPB-201ENST00000361246 C5orf58C9J3I9 102 aa21.27■□□□□ 0.99
CDC42BPB-201ENST00000361246 ZNF177Q13360 481 aaPredicted RBP21.27■□□□□ 0.99
CDC42BPB-201ENST00000361246 BARGINQ6ZT62 677 aa21.27■□□□□ 0.99
CDC42BPB-201ENST00000361246 BLOC1S5Q8TDH9 187 aa21.27■□□□□ 0.99
CDC42BPB-201ENST00000361246 DACH2Q96NX9 599 aa21.27■□□□□ 0.99
CDC42BPB-201ENST00000361246 POP1Q99575 1024 aaKnown RBP21.27■□□□□ 0.99
CDC42BPB-201ENST00000361246 ACO1P21399 889 aaKnown RBP21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 PCSK1P29120 753 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 FMO5P49326 533 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 HIF1AQ16665 826 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 C1orf146Q5VVC0 180 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 IGDCC4Q8TDY8 1250 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 RNF208Q9H0X6 261 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 LRRC7Q96NW7 1537 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 PLCL1Q15111 1095 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 FSCBQ5H9T9 825 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 NMRK2Q9NPI5 230 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 ASAP2O43150 1006 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 PJA2O43164 708 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 IL18RAPO95256 599 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 ATP1A1P05023 1023 aaKnown RBP21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 EFEMP1Q12805 493 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 FLOT2Q14254 428 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 RPRD1AQ96P16 312 aaPredicted RBP21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 CHST12Q9NRB3 414 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 TRIM33Q9UPN9 1127 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 RFC5P40937 340 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 UBE3AQ05086 875 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 FAXCQ5TGI0 409 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 ARHGAP18Q8N392 663 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 CATSPERBQ9H7T0 1116 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 SMARCAL1Q9NZC9 954 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 TRIM10Q9UDY6 481 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 MARCOQ9UEW3 520 aaPredicted RBP21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 CDV3Q9UKY7 258 aaKnown RBP21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 ESRRGP62508 458 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 PWP1Q13610 501 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 KRT72Q14CN4 511 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 ENOSF1Q7L5Y1 443 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 AGBL3Q8NEM8 1001 aa21.26■□□□□ 0.99
CDC42BPB-201ENST00000361246 A8MX80 341 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 MIF4GDA9UHW6 222 aaKnown RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 TAF6P49848 677 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 MDM2Q00987 491 aaPredicted RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 PHF20Q9BVI0 1012 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 FBXO2Q9UK22 296 aaPredicted RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 PCDHB12Q9Y5F1 795 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 MYO1GB0I1T2 1018 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 SYNCRIPO60506 623 aaKnown RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 PRAMEF19Q5SWL8 479 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 SCUBE2Q9NQ36 999 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 WARS2Q9UGM6 360 aaKnown RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 RALBP11234 206 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 TGS1Q96RS0 853 aaKnown RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 TMEM60Q9H2L4 133 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 SMAP1Q8IYB5 467 aaPredicted RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 RNF17Q9BXT8 1623 aaKnown RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 CUL3Q13618 768 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 TMEM132BQ14DG7 1078 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.25■□□□□ 0.992e-6■■■□□ 18.9
CDC42BPB-201ENST00000361246 TASP1Q9H6P5 420 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 EML4Q9HC35 981 aaKnown RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 MYO3AQ8NEV4 1616 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 ZNF263O14978 683 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 PDXDC1Q6P996 788 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 GTF3C2Q8WUA4 911 aaPredicted RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 CNOT10Q9H9A5 744 aaKnown RBP21.25■□□□□ 0.99
CDC42BPB-201ENST00000361246 BEX3Q00994 111 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 OOSP2Q86WS3 158 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 ERO1BQ86YB8 467 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 PDGFDQ9GZP0 370 aaPredicted RBP21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 BRD8Q9H0E9 1235 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 CRLS1Q9UJA2 301 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 SLC37A4O43826 429 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 EXTL3O43909 919 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 GGCXP38435 758 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 BACE1P56817 501 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 TAP1Q03518 808 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 BFSP2Q13515 415 aa21.24■□□□□ 0.99
CDC42BPB-201ENST00000361246 TTC39CQ8N584 583 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms