RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CCNA1P78396 465 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 MAMLD1Q13495 774 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 LAMC2Q13753 1193 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 KRT71Q3SY84 523 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 LIN9Q5TKA1 542 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 TMEM192Q8IY95 271 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 VCPIP1Q96JH7 1222 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 MS4A4AQ96JQ5 239 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 NIF3L1Q9GZT8 377 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 IFT122Q9HBG6 1241 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 PPANQ9NQ55 473 aaKnown RBP24.03■■□□□ 1.44
LDB1-201ENST00000361198 CISHQ9NSE2 258 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 BCCIPQ9P287 314 aaKnown RBP eCLIP24.03■■□□□ 1.44
LDB1-201ENST00000361198 RASAL2Q9UJF2 1139 aa24.03■■□□□ 1.44
LDB1-201ENST00000361198 ASAP2O43150 1006 aa24.02■■□□□ 1.44
LDB1-201ENST00000361198 TMEM191BP0C7N4 346 aa24.02■■□□□ 1.44
LDB1-201ENST00000361198 TRPC3Q13507 836 aa24.02■■□□□ 1.44
LDB1-201ENST00000361198 ZNF394Q53GI3 561 aa24.02■■□□□ 1.44
LDB1-201ENST00000361198 ODF2Q5BJF6 829 aa24.02■■□□□ 1.44
LDB1-201ENST00000361198 GTF3C2Q8WUA4 911 aaPredicted RBP24.02■■□□□ 1.44
LDB1-201ENST00000361198 CDT1Q9H211 546 aa24.02■■□□□ 1.44
LDB1-201ENST00000361198 BTBD19C9JJ37 291 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 PROSCO94903 275 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 COILP38432 576 aaPredicted RBP24.01■■□□□ 1.43
LDB1-201ENST00000361198 FNTAP49354 379 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 MAGOHP61326 146 aaKnown RBP24.01■■□□□ 1.43
LDB1-201ENST00000361198 PLEKHA7Q6IQ23 1121 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 ZDHHC24Q6UX98 284 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 PABPC3Q9H361 631 aaKnown RBP24.01■■□□□ 1.43
LDB1-201ENST00000361198 TNFSF13BQ9Y275 285 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 PLXNB2O15031 1838 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 DCDC2CA8MYV0 355 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 FSCN2O14926 492 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 B4GALT4O60513 344 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 WEE2P0C1S8 567 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 KCNJ1P48048 391 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 CCDC105Q8IYK2 499 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 PPP1R16BQ96T49 567 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 PLVAPQ9BX97 442 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 XYLT2Q9H1B5 865 aa24.01■■□□□ 1.43
LDB1-201ENST00000361198 GH1P01241 217 aa24■■□□□ 1.43
LDB1-201ENST00000361198 CXCL8P10145 99 aa24■■□□□ 1.43
LDB1-201ENST00000361198 TMOD1P28289 359 aa24■■□□□ 1.43
LDB1-201ENST00000361198 ADCYAP1R1P41586 468 aa24■■□□□ 1.43
LDB1-201ENST00000361198 C1QBPQ07021 282 aaKnown RBP24■■□□□ 1.43
LDB1-201ENST00000361198 ZNF484Q5JVG2 852 aa24■■□□□ 1.43
LDB1-201ENST00000361198 MAP1SQ66K74 1059 aaPredicted RBP24■■□□□ 1.43
LDB1-201ENST00000361198 AFG1LQ8WV93 481 aa24■■□□□ 1.43
LDB1-201ENST00000361198 DDX27Q96GQ7 796 aaKnown RBP24■■□□□ 1.43
LDB1-201ENST00000361198 LRRC4CQ9HCJ2 640 aa24■■□□□ 1.43
LDB1-201ENST00000361198 MRPL47Q9HD33 250 aaKnown RBP24■■□□□ 1.43
LDB1-201ENST00000361198 CLEC11AQ9Y240 323 aa24■■□□□ 1.43
LDB1-201ENST00000361198 GPR25O00155 361 aa24■■□□□ 1.43
LDB1-201ENST00000361198 O00370 1275 aa24■■□□□ 1.43
LDB1-201ENST00000361198 PODXLO00592 558 aa24■■□□□ 1.43
LDB1-201ENST00000361198 GJB6O95452 261 aa24■■□□□ 1.43
LDB1-201ENST00000361198 GBP1P32455 592 aa24■■□□□ 1.43
LDB1-201ENST00000361198 PLTPP55058 493 aa24■■□□□ 1.43
LDB1-201ENST00000361198 ZNF699Q32M78 642 aa24■■□□□ 1.43
LDB1-201ENST00000361198 SCARA5Q6ZMJ2 495 aa24■■□□□ 1.43
LDB1-201ENST00000361198 SUGP1Q8IWZ8 645 aaKnown RBP24■■□□□ 1.43
LDB1-201ENST00000361198 FBXO25Q8TCJ0 367 aa24■■□□□ 1.43
LDB1-201ENST00000361198 NFKBIZQ9BYH8 718 aa24■■□□□ 1.43
LDB1-201ENST00000361198 VTA1Q9NP79 307 aa24■■□□□ 1.43
LDB1-201ENST00000361198 GRHL1Q9NZI5 618 aa24■■□□□ 1.43
LDB1-201ENST00000361198 PTPN22Q9Y2R2 807 aa24■■□□□ 1.43
LDB1-201ENST00000361198 SCN4AP35499 1836 aa24■■□□□ 1.43
LDB1-201ENST00000361198 A0A087WZ62 844 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 CCL15-CCL14A0A0B4J2E2 113 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 IQCA1LA6NCM1 817 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 C5orf60A6NFR6 353 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 ZNF286BP0CG31 522 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 BRD2P25440 801 aaKnown RBP23.99■■□□□ 1.43
LDB1-201ENST00000361198 PMS2P54278 862 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 IFFO1Q0D2I5 559 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 CCL15Q16663 113 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 HOOK3Q86VS8 718 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 C12orf50Q8NA57 414 aaPredicted RBP23.99■■□□□ 1.43
LDB1-201ENST00000361198 ANKRD36BP1Q96IX9 119 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 FDXACB1Q9BRP7 624 aaPredicted RBP23.99■■□□□ 1.43
LDB1-201ENST00000361198 HERPUD2Q9BSE4 406 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 CNOT10Q9H9A5 744 aaKnown RBP23.99■■□□□ 1.43
LDB1-201ENST00000361198 TLR3O15455 904 aaKnown RBP23.99■■□□□ 1.43
LDB1-201ENST00000361198 TNNC2P02585 160 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 CETPP11597 493 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 MMP8P22894 467 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 ASPAP45381 313 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 RPL21P46778 160 aaKnown RBP23.99■■□□□ 1.43
LDB1-201ENST00000361198 CNPY4Q8N129 248 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 PPTC7Q8NI37 304 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 KATNBL1Q9H079 304 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 LRRC19Q9H756 370 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 PRMT7Q9NVM4 692 aaPredicted RBP23.99■■□□□ 1.43
LDB1-201ENST00000361198 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.99■■□□□ 1.43
LDB1-201ENST00000361198 SCINQ9Y6U3 715 aa23.99■■□□□ 1.43
LDB1-201ENST00000361198 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.98■■□□□ 1.43
LDB1-201ENST00000361198 BYSLQ13895 437 aaKnown RBP23.98■■□□□ 1.43
LDB1-201ENST00000361198 PNMA8AQ86V59 439 aaPredicted RBP23.98■■□□□ 1.43
LDB1-201ENST00000361198 TMEM130Q8N3G9 435 aa23.98■■□□□ 1.43
LDB1-201ENST00000361198 LINC01465Q8N7H1 131 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms