RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 KIAA1586Q9HCI6 787 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 PCDHA6Q9UN73 950 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 AGAP1Q9UPQ3 857 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 PCDHA8Q9Y5H6 950 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 GNG14A0A1W2PPG7 69 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 C17orf102A2RUQ5 167 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 FAM25AB3EWG3 89 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 FAM25CB3EWG5 89 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 FAM25GB3EWG6 89 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 HS6ST1O60243 411 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 CCNT2O60583 730 aaKnown RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 DGKIO75912 1065 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 TRIM16O95361 564 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 CLTBP09497 229 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 S100A5P33763 92 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 THOP1P52888 689 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 NME5P56597 212 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 BMP2KLQ5H9B9 411 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 ANKMY2Q8IV38 441 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 KCNV2Q8TDN2 545 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 ATXN3LQ9H3M9 355 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 FAM49BQ9NUQ9 324 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 HDAC6Q9UBN7 1215 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 CHKBQ9Y259 395 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 LEMD3Q9Y2U8 911 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 TIMM8BQ9Y5J9 83 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 UBE2Q2LH0YL09 131 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 EEF2KO00418 725 aaKnown RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 RGS5O15539 181 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 KCNN4O15554 427 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 NPTXRO95502 500 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 ADORA1P30542 326 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 COX10Q12887 443 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 PTPAQ15257 358 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 TMC4Q7Z404 712 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 DCP1BQ8IZD4 617 aaKnown RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 CCDC33Q8N5R6 958 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 ANKRD44Q8N8A2 993 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 OR2W6PQ8NHA6 318 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 PTPRN2Q92932 1015 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 GFM2Q969S9 779 aaKnown RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 SHCBP1LQ9BZQ2 653 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 LNPEPQ9UIQ6 1025 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 PCDHB6Q9Y5E3 794 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 AKAP10O43572 662 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 NUDT2P50583 147 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 CASP9P55211 416 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 RIN1Q13671 783 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 SUZ12Q15022 739 aaKnown RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 C15orf59Q2T9L4 293 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 ERMARDQ5T6L9 678 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 ANGEL2Q5VTE6 544 aaKnown RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 OLFML2BQ68BL8 750 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 RPTNQ6XPR3 784 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 STX12Q86Y82 276 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 OR8K1Q8NGG5 319 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 BLOC1S5Q8TDH9 187 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 GINS4Q9BRT9 223 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 EMILIN2Q9BXX0 1053 aa6.06□□□□□ -1.44
BRCA1-203ENST00000357654 TLR8Q9NR97 1041 aaKnown RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 NDRG2Q9UN36 371 aaKnown RBP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.06□□□□□ -1.44
BRCA1-203ENST00000357654 CYP2F1P24903 491 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 PTPN7P35236 360 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 CPT1AP50416 773 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 EPS8Q12929 822 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 LRP8Q14114 963 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 PPM1LQ5SGD2 360 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 IQSEC1Q6DN90 963 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 EPHX4Q8IUS5 362 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 SLITRK1Q96PX8 696 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 XPO6Q96QU8 1125 aaKnown RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 RNF208Q9H0X6 261 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 CBX8Q9HC52 389 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 JRKLQ9Y4A0 524 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 PIPSLA2A3N6 862 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 MPOP05164 745 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 IL10P22301 178 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 CHMLP26374 656 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 TYK2P29597 1187 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 STAT3P40763 770 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 CDH6P55285 790 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 RUNX1T1Q06455 604 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ZSWIM7Q19AV6 140 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 DGKKQ5KSL6 1271 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 OR10G6Q8NH81 332 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 WDR36Q8NI36 951 aaKnown RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 MCOLN3Q8TDD5 553 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 SH3RF3Q8TEJ3 882 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 C18orf25Q96B23 403 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 SH2D3AQ9BRG2 576 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 HDHD2Q9H0R4 259 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ALDH8A1Q9H2A2 487 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 DIABLOQ9NR28 239 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.05□□□□□ -1.447e-7■□□□□ 9.9
BRCA1-203ENST00000357654 CPA4Q9UI42 421 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 RIMS2Q9UQ26 1411 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 CLASP2O75122 1294 aaKnown RBP6.05□□□□□ -1.44
BRCA1-203ENST00000357654 PFKFB1P16118 471 aa6.05□□□□□ -1.44
BRCA1-203ENST00000357654 ADD1P35611 737 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms