RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GLYCTKQ8IVS8 523 aa19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 TXLNBQ8N3L3 684 aa19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 INPP5FQ9Y2H2 1132 aa19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 PCDHA13Q9Y5I0 950 aa19.41■□□□□ 0.7
SMARCD3-202ENST00000356800 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 KIAA0355O15063 1070 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 FGFR1P11362 822 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 TNNC1P63316 161 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 TAF3Q5VWG9 929 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 SMYD5Q6GMV2 418 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 FAM43BQ6ZT52 329 aaPredicted RBP19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 KIAA1328Q86T90 577 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 CYP3A43Q9HB55 503 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 TMEM161AQ9NX61 479 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 PCDH10Q9P2E7 1040 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 NAGPAQ9UK23 515 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 P4HA1P13674 534 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 FMO1Q01740 532 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 GRIK3Q13003 919 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 C10orf76Q5T2E6 689 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 RPUSD2Q8IZ73 545 aaKnown RBP19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 CRIPAKQ8N1N5 446 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 WHAMMQ8TF30 809 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 ZNF560Q96MR9 790 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 PCDHB18PQ96TA0 734 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 PAAF1Q9BRP4 392 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 TSGA10Q9BZW7 698 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 LACRTQ9GZZ8 138 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 ELAC1Q9H777 363 aaKnown RBP19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 LUC7LQ9NQ29 371 aaKnown RBP19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 MYO1AQ9UBC5 1043 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 SNX9Q9Y5X1 595 aa19.4■□□□□ 0.7
SMARCD3-202ENST00000356800 LTBP2Q14767 1821 aa19.39■□□□□ 0.7
SMARCD3-202ENST00000356800 KRT86O43790 486 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 KIF5CO60282 957 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 TIMP1P01033 207 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 MMEP08473 750 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 TNFAIP3P21580 790 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 MAGEA1P43355 309 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 PDE6CP51160 858 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 LILRA4P59901 499 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 GLB1LQ6UWU2 654 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 DNAAF5Q86Y56 855 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 KIF18AQ8NI77 898 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 MMS19Q96T76 1030 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 PRDM5Q9NQX1 630 aaPredicted RBP19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 HMGXB4Q9UGU5 601 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 PAXBP1Q9Y5B6 917 aa19.39■□□□□ 0.69
SMARCD3-202ENST00000356800 CASTOR2A6NHX0 329 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 KPNA7A9QM74 516 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 CILPO75339 1184 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 PNPLA4P41247 253 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 TAF6P49848 677 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 CLCNKBP51801 687 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 BPIFB4P59827 614 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 YWHAEP62258 255 aaKnown RBP19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 CDR2Q01850 454 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 KIF5AQ12840 1032 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 ZNF394Q53GI3 561 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 ALKBH5Q6P6C2 394 aaKnown RBP19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 SYT10Q6XYQ8 523 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 RABGGTAQ92696 567 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 TWNKQ96RR1 684 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 GDAP2Q9NXN4 497 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 TRIM10Q9UDY6 481 aa19.38■□□□□ 0.69
SMARCD3-202ENST00000356800 FNDC1Q4ZHG4 1894 aaPredicted RBP19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 ATP8B3O60423 1300 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 PODXLO00592 558 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 PJA2O43164 708 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 B4GALT3O60512 393 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 RFC2P35250 354 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 RAD23BP54727 409 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 GNG11P61952 73 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 INCA1Q0VD86 236 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 UPP1Q16831 310 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 SOWAHAQ2M3V2 549 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 SV2CQ496J9 727 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 CCDC122Q5T0U0 273 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 LIMS2Q7Z4I7 341 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 C3orf58Q8NDZ4 430 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 ZSWIM1Q9BR11 485 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 MRPL45Q9BRJ2 306 aaKnown RBP19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 PACSIN1Q9BY11 444 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 ELOVL4Q9GZR5 314 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 TAS2R14Q9NYV8 317 aa19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.37■□□□□ 0.69
SMARCD3-202ENST00000356800 CFHP08603 1231 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 GNA15P30679 374 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 RPL9P32969 192 aaKnown RBP19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 ORC1Q13415 861 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 TUSC3Q13454 348 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 NOMO2Q5JPE7 1267 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 CNKSR3Q6P9H4 555 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 SEPT11Q9NVA2 429 aaKnown RBP19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 NME7Q9Y5B8 376 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 PCDHB7Q9Y5E2 793 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 CSF2RAP15509 400 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 GATMP50440 423 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 CD300LGQ6UXG3 332 aa19.36■□□□□ 0.69
SMARCD3-202ENST00000356800 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms