RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SNX9Q9Y5X1 595 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 ENPP3O14638 875 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 KRT86O43790 486 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 ABL1P00519 1130 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 CHRNB2P17787 502 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 GNA15P30679 374 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 ARHGAP25P42331 645 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 TAF6P49848 677 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 FMO1Q01740 532 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 ZNF394Q53GI3 561 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 TTC39CQ8N584 583 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 TSGA10Q9BZW7 698 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 LACRTQ9GZZ8 138 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 INPP5FQ9Y2H2 1132 aa16.67■□□□□ 0.26
CTSA-202ENST00000354880 TDRD15B5MCY1 1934 aaKnown RBP16.67■□□□□ 0.26
CTSA-202ENST00000354880 KPNA7A9QM74 516 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 INPPL1O15357 1258 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 POMCP01189 267 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 CALCAP01258 141 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 MMEP08473 750 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 GRIK3Q13003 919 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 SV2CQ496J9 727 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 GLB1LQ6UWU2 654 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 PALB2Q86YC2 1186 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 ELAC1Q9H777 363 aaKnown RBP16.66■□□□□ 0.26
CTSA-202ENST00000354880 TMEM161AQ9NX61 479 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 KIF2AO00139 706 aaPredicted RBP16.66■□□□□ 0.26
CTSA-202ENST00000354880 PJA2O43164 708 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 CILPO75339 1184 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 TNNT1P13805 278 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 LILRA4P59901 499 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 INCA1Q0VD86 236 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 DNTTIP2Q5QJE6 756 aaKnown RBP16.66■□□□□ 0.26
CTSA-202ENST00000354880 DEFB128Q7Z7B8 93 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 GDAP2Q9NXN4 497 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 TRIM10Q9UDY6 481 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 GUCA1BQ9UMX6 200 aa16.66■□□□□ 0.26
CTSA-202ENST00000354880 PODXLO00592 558 aa16.65■□□□□ 0.26
CTSA-202ENST00000354880 SPTLC1O15269 473 aa16.65■□□□□ 0.26
CTSA-202ENST00000354880 TUBB4AP04350 444 aa16.65■□□□□ 0.26
CTSA-202ENST00000354880 RPL9P32969 192 aaKnown RBP16.65■□□□□ 0.26
CTSA-202ENST00000354880 CLCNKBP51801 687 aa16.65■□□□□ 0.26
CTSA-202ENST00000354880 TCTN1Q2MV58 587 aa16.65■□□□□ 0.26
CTSA-202ENST00000354880 PCDHB18PQ96TA0 734 aa16.65■□□□□ 0.26
CTSA-202ENST00000354880 PACSIN1Q9BY11 444 aa16.65■□□□□ 0.26
CTSA-202ENST00000354880 PUF60Q9UHX1 559 aaKnown RBP16.65■□□□□ 0.26
CTSA-202ENST00000354880 BARX2Q9UMQ3 279 aaPredicted RBP16.65■□□□□ 0.26
CTSA-202ENST00000354880 ATP8B3O60423 1300 aa16.65■□□□□ 0.26
CTSA-202ENST00000354880 CASTOR2A6NHX0 329 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 TMCO5BA8MYB1 307 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 THAP12O43422 761 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 KIF5CO60282 957 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 GZMAP12544 262 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 ETF1P62495 437 aaKnown RBP16.64■□□□□ 0.25
CTSA-202ENST00000354880 TUSC3Q13454 348 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 CLLU1OSQ5K130 101 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 WHAMMQ8TF30 809 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 ZNF606Q8WXB4 792 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 IRX2Q9BZI1 471 aaPredicted RBP16.64■□□□□ 0.25
CTSA-202ENST00000354880 TAS2R14Q9NYV8 317 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 CACNG4Q9UBN1 327 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 PCDHB7Q9Y5E2 793 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 DUSP10Q9Y6W6 482 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 TTC3P53804 2025 aa16.64■□□□□ 0.25
CTSA-202ENST00000354880 PAEPP09466 180 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 H2AFZP0C0S5 128 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 FGFR1P11362 822 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 RFC2P35250 354 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 NDST1P52848 882 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 RAD23BP54727 409 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 UPP1Q16831 310 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 SOWAHAQ2M3V2 549 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 NOMO2Q5JPE7 1267 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 H2AFVQ71UI9 128 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 DNAAF5Q86Y56 855 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 URGCPQ8TCY9 931 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 TMEM176AQ96HP8 235 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 ISCUQ9H1K1 167 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 PDCL3Q9H2J4 239 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 PRDM5Q9NQX1 630 aaPredicted RBP16.63■□□□□ 0.25
CTSA-202ENST00000354880 HMGXB4Q9UGU5 601 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 INTUQ9ULD6 942 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.63■□□□□ 0.25
CTSA-202ENST00000354880 RTN2O75298 545 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 TIMP1P01033 207 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 EN2P19622 333 aaPredicted RBP16.63■□□□□ 0.25
CTSA-202ENST00000354880 GNG11P61952 73 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 CNKSR3Q6P9H4 555 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 SLC4A11Q8NBS3 891 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 DDX27Q96GQ7 796 aaKnown RBP16.63■□□□□ 0.25
CTSA-202ENST00000354880 UROC1Q96N76 676 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 TWNKQ96RR1 684 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 MRPL45Q9BRJ2 306 aaKnown RBP16.63■□□□□ 0.25
CTSA-202ENST00000354880 ELOVL4Q9GZR5 314 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 KANSL3Q9P2N6 904 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 MYO1AQ9UBC5 1043 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
CTSA-202ENST00000354880 MACROD2A1Z1Q3 448 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 TRIM43BA6NCK2 446 aa16.62■□□□□ 0.25
CTSA-202ENST00000354880 KIAA0355O15063 1070 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms