RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 SLC4A9Q96Q91 983 aa5.39□□□□□ -1.55
CKAP5-202ENST00000354558 POP1Q99575 1024 aaKnown RBP5.39□□□□□ -1.55
CKAP5-202ENST00000354558 APBA2Q99767 749 aa5.39□□□□□ -1.55
CKAP5-202ENST00000354558 POLR3CQ9BUI4 534 aaPredicted RBP5.39□□□□□ -1.55
CKAP5-202ENST00000354558 PIH1D3Q9NQM4 214 aaKnown RBP5.39□□□□□ -1.55
CKAP5-202ENST00000354558 ZNHIT2Q9UHR6 403 aa5.39□□□□□ -1.55
CKAP5-202ENST00000354558 MAD2L2Q9UI95 211 aa5.39□□□□□ -1.55
CKAP5-202ENST00000354558 RGS16O15492 202 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 KLHL18O94889 574 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 HSPA4LO95757 839 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 VCAM1P19320 739 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 JAK1P23458 1154 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 GUCY2CP25092 1073 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 GPC1P35052 558 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 MMP14P50281 582 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 FOXM1Q08050 763 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ZNF827Q17R98 1081 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 QRICH1Q2TAL8 776 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 PRAMEF19Q5SWL8 479 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 CAPRIN2Q6IMN6 1127 aaKnown RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 PACS1Q6VY07 963 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 SETD3Q86TU7 594 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 RASGRP3Q8IV61 690 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 CCDC60Q8IWA6 550 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 LEMD2Q8NC56 503 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 RDM1Q8NG50 284 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TDRD7Q8NHU6 1098 aaKnown RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 CXorf38Q8TB03 319 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 FAR1Q8WVX9 515 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 SERAC1Q96JX3 654 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 NUP85Q9BW27 656 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 BCL2L14Q9BZR8 327 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ZDHHC6Q9H6R6 413 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 FAM49BQ9NUQ9 324 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ADAM22Q9P0K1 906 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 PCDHGB3Q9Y5G1 929 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ROBO2Q9HCK4 1378 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3DA0A087WVF3 549 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3IA0A087WXS9 549 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3EA0A087X179 549 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3KA0A087X1G2 549 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 PNMA6EA0A0J9YXQ4 647 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3FA6NER0 549 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3LB9A6J9 549 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 PSMD3O43242 534 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 BMP10O95393 424 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 FGF19O95750 216 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ADH1CP00326 375 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 EIF2S1P05198 315 aaKnown RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3HP0C7X1 549 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 SPATA31D3P0C874 917 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 SLC2A3P11169 496 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 AKR1B1P15121 316 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 SLC9A1P19634 815 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 GRK2P25098 689 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 CASRP41180 1078 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 HERVK_113P62684 666 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 KDSRQ06136 332 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 NR5A1Q13285 461 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 GPM6BQ13491 265 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3GQ6DHY5 549 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3CQ6IPX1 549 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 PPP1R18Q6NYC8 613 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ZCCHC8Q6NZY4 707 aaKnown RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 SPATA31D4Q6ZUB0 917 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 VN1R5Q7Z5H4 357 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TBC1D3Q8IZP1 549 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 BRD8Q9H0E9 1235 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TXLNGQ9NUQ3 528 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 PRMT7Q9NVM4 692 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 DPP3Q9NY33 737 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 LIMA1Q9UHB6 759 aaKnown RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 SETD1BQ9UPS6 1966 aaKnown RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 RIC1Q4ADV7 1423 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TJP3O95049 919 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 NR3C2P08235 984 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 H2AFZP0C0S5 128 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ZFXP17010 805 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 CHI3L1P36222 383 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ERVK-21P61565 698 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ERVK-9P63128 1117 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ERVK-24P63145 666 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 FSTL1Q12841 308 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ANKRD20A4Q4UJ75 823 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ANKRD20A8PQ5CZ79 823 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TCEAL5Q5H9L2 206 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ANKRD20A2Q5SQ80 823 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 PHF19Q5T6S3 580 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ANKRD20A1Q5TYW2 823 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 H2AFVQ71UI9 128 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 CDKL3Q8IVW4 592 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 TTLL11Q8NHH1 800 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 SLC20A1Q8WUM9 679 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 KIAA1143Q96AT1 154 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 MTMR8Q96EF0 704 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ZNF274Q96GC6 653 aaPredicted RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 ELMO2Q96JJ3 720 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 USB1Q9BQ65 265 aaKnown RBP5.38□□□□□ -1.55
CKAP5-202ENST00000354558 VCPKMTQ9H867 229 aa5.38□□□□□ -1.55
CKAP5-202ENST00000354558 FANCFQ9NPI8 374 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms