RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 OATP04181 439 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 WEE2P0C1S8 567 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 MARK3P27448 753 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 ZNF772Q68DY9 489 aaPredicted RBP20.72■□□□□ 0.91
COL13A1-201ENST00000354547 CDR2LQ86X02 465 aaPredicted RBP20.72■□□□□ 0.91
COL13A1-201ENST00000354547 SCYL3Q8IZE3 742 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 TBC1D31Q96DN5 1066 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 SAE1Q9UBE0 346 aaPredicted RBP20.72■□□□□ 0.91
COL13A1-201ENST00000354547 AGAP1Q9UPQ3 857 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 SPATA31C2B4DYI2 1134 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 SRGAP2CP0DJJ0 459 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 FASTKD3Q14CZ7 662 aaKnown RBP20.72■□□□□ 0.91
COL13A1-201ENST00000354547 ANKRD35Q8N283 1001 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 GPATCH11Q8N954 259 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 CCDC63Q8NA47 563 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 TGS1Q96RS0 853 aaKnown RBP20.72■□□□□ 0.91
COL13A1-201ENST00000354547 TEX13BQ9BXU2 312 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 MTMR12Q9C0I1 747 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 PORCNQ9H237 461 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 FER1L6Q2WGJ9 1857 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 RASA4BC9J798 803 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 RASA4O43374 803 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 PSTPIP1O43586 416 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 MAGEA4P43358 317 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 ITIH4Q14624 930 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 SYDE1Q6ZW31 735 aaPredicted RBP20.72■□□□□ 0.91
COL13A1-201ENST00000354547 IMPG2Q9BZV3 1241 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 PARVAQ9NVD7 372 aa20.72■□□□□ 0.91
COL13A1-201ENST00000354547 WDR81Q562E7 1941 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 H0YCG3 227 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 CHUKO15111 745 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 BANF1O75531 89 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 ATP5DP30049 168 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 ARSEP51690 589 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 RTP1P59025 263 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 MCCD1P59942 119 aaPredicted RBP20.71■□□□□ 0.91
COL13A1-201ENST00000354547 GPS1Q13098 491 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 FAM228AQ86W67 206 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 CDHR1Q96JP9 859 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.71■□□□□ 0.91
COL13A1-201ENST00000354547 USP15Q9Y4E8 981 aaPredicted RBP20.71■□□□□ 0.91
COL13A1-201ENST00000354547 MYL6P60660 151 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 PLEKHA7Q6IQ23 1121 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 KATNAL2Q8IYT4 538 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 TMEM130Q8N3G9 435 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 CAMKK2Q96RR4 588 aa20.71■□□□□ 0.91
COL13A1-201ENST00000354547 LRRD1A4D1F6 860 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 CLDN10P78369 228 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 XRCC4Q13426 336 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 EXD1Q8NHP7 514 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 CCDC134Q9H6E4 229 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 KIF9Q9HAQ2 790 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 NKIRAS1Q9NYS0 192 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 PIM2Q9P1W9 311 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 NEU2Q9Y3R4 380 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 SCINQ9Y6U3 715 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 A0A0B4J269 797 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 EXOC1LA0A1B0GW35 172 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 CETN2P41208 172 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 PTP4A2Q12974 167 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 STXBP2Q15833 593 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 SMTNL2Q2TAL5 461 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 KIF2BQ8N4N8 673 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 CGRRF1Q99675 332 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 CCDC77Q9BR77 488 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 VPS37BQ9H9H4 285 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 PNMA3Q9UL41 463 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 GHRP10912 638 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 ELF3P78545 371 aaPredicted RBP20.7■□□□□ 0.9
COL13A1-201ENST00000354547 OGDHQ02218 1023 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 CAV1Q03135 178 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 ORC1Q13415 861 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 ANGEL2Q5VTE6 544 aaKnown RBP20.7■□□□□ 0.9
COL13A1-201ENST00000354547 SLFN12LQ6IEE8 588 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 DNAJC24Q6P3W2 148 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 P3H4Q92791 437 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 TMEM121Q9BTD3 319 aa20.7■□□□□ 0.9
COL13A1-201ENST00000354547 NAMPTP43490 491 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 TFAMQ00059 246 aaKnown RBP20.69■□□□□ 0.9
COL13A1-201ENST00000354547 CAPSQ13938 189 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 SWT1Q5T5J6 900 aaKnown RBP20.69■□□□□ 0.9
COL13A1-201ENST00000354547 DEFB132Q7Z7B7 95 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 PHF13Q86YI8 300 aaPredicted RBP20.69■□□□□ 0.9
COL13A1-201ENST00000354547 DHX33Q9H6R0 707 aaKnown RBP20.69■□□□□ 0.9
COL13A1-201ENST00000354547 CDH16O75309 829 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 ZNF252P-AS1Q0IIN9 211 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 KCNT1Q5JUK3 1230 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 GPAT2Q6NUI2 795 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 DLK2Q6UY11 383 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 TRIM72Q6ZMU5 477 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 PRPF31Q8WWY3 499 aaKnown RBP20.69■□□□□ 0.9
COL13A1-201ENST00000354547 SLITRK1Q96PX8 696 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 IP6K2Q9UHH9 426 aa20.69■□□□□ 0.9
COL13A1-201ENST00000354547 COL11A1P12107 1806 aaPredicted RBP20.69■□□□□ 0.9
COL13A1-201ENST00000354547 NFASCO94856 1347 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 CNTNAP2Q9UHC6 1331 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 DNAJC8O75937 253 aaPredicted RBP20.68■□□□□ 0.9
COL13A1-201ENST00000354547 SUN1O94901 812 aa20.68■□□□□ 0.9
COL13A1-201ENST00000354547 PECAM1P16284 738 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms