RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 CNTN6Q9UQ52 1028 aa21.53■■□□□ 1.04
SIGMAR1-202ENST00000353468 BZW2Q9Y6E2 419 aaKnown RBP21.53■■□□□ 1.04
SIGMAR1-202ENST00000353468 FNDC1Q4ZHG4 1894 aaPredicted RBP21.52■■□□□ 1.04
SIGMAR1-202ENST00000353468 CLCN1P35523 988 aa21.52■■□□□ 1.04
SIGMAR1-202ENST00000353468 PAN2Q504Q3 1202 aaKnown RBP21.52■■□□□ 1.04
SIGMAR1-202ENST00000353468 TDRD12Q587J7 1177 aaKnown RBP21.52■■□□□ 1.04
SIGMAR1-202ENST00000353468 TMEM270Q6UE05 265 aa21.52■■□□□ 1.04
SIGMAR1-202ENST00000353468 FAM124BQ9H5Z6 455 aaPredicted RBP21.52■■□□□ 1.04
SIGMAR1-202ENST00000353468 HAUS4Q9H6D7 363 aa21.52■■□□□ 1.04
SIGMAR1-202ENST00000353468 DNAJB4Q9UDY4 337 aa21.52■■□□□ 1.04
SIGMAR1-202ENST00000353468 SOWAHDA6NJG2 315 aa21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 ARHGAP6O43182 974 aa21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 PLEKP08567 350 aaPredicted RBP21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 PAX3P23760 479 aa21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 OR1G1P47890 313 aa21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 FAM117BQ6P1L5 589 aa21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 TMCO2Q7Z6W1 182 aaPredicted RBP21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 LRRC43Q8N309 656 aa21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 ZNF689Q96CS4 500 aaPredicted RBP21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 NHEJ1Q9H9Q4 299 aaPredicted RBP21.51■■□□□ 1.03
SIGMAR1-202ENST00000353468 SSU72P8A0A1W2PR75 194 aa21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 HUS1O60921 280 aa21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 AARSP49588 968 aaKnown RBP eCLIP21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 SOWAHAQ2M3V2 549 aa21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 CD300LGQ6UXG3 332 aa21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 DPH6Q7L8W6 267 aa21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 TTC39CQ8N584 583 aa21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 RBBP8NLQ8NC74 664 aaPredicted RBP21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 HERVK_113Q902F9 699 aa21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 SENP8Q96LD8 212 aa21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 NR2E3Q9Y5X4 410 aa21.5■■□□□ 1.03
SIGMAR1-202ENST00000353468 CYB561D2O14569 222 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 ALDH2P05091 517 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 EIF4A3P38919 411 aaKnown RBP21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 BPIFB4P59827 614 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 PTK2Q05397 1052 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 MAPK8IP2Q13387 824 aaPredicted RBP21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 TIGD5Q53EQ6 642 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 RAD9BQ6WBX8 426 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 DSTYKQ6XUX3 929 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 LIMS2Q7Z4I7 341 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 SLC47A2Q86VL8 602 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 TOP6BLQ8N6T0 577 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 APPL2Q8NEU8 664 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 CCDC42Q96M95 316 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 MRPL45Q9BRJ2 306 aaKnown RBP21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 TMEM175Q9BSA9 504 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 HCSTQ9UBK5 93 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 BARX2Q9UMQ3 279 aaPredicted RBP21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 L1RE1Q9UN81 338 aa21.49■■□□□ 1.03
SIGMAR1-202ENST00000353468 TMEM189-UBE2V1I3L0A0 370 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 NRP1O14786 923 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 CILPO75339 1184 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 TACC1O75410 805 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 KIF4AO95239 1232 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 ZNF132P52740 706 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 INCA1Q0VD86 236 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 MTF1Q14872 753 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 ZNF394Q53GI3 561 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 ZNF571Q7Z3V5 609 aaPredicted RBP21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 CCDC170Q8IYT3 715 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 HASPINQ8TF76 798 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 DEF6Q9H4E7 631 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 RC3H2Q9HBD1 1191 aaKnown RBP21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 ACP6Q9NPH0 428 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 CXXC1Q9P0U4 656 aaPredicted RBP21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 FAN1Q9Y2M0 1017 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 PRG3Q9Y2Y8 225 aaPredicted RBP21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 FAM163BP0C2L3 166 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 CYP11B1P15538 503 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 BRCC3P46736 316 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 WHAMMQ8TF30 809 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 COLEC11Q9BWP8 271 aa21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 EPN1Q9Y6I3 576 aaPredicted RBP21.48■■□□□ 1.03
SIGMAR1-202ENST00000353468 F8W810 466 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 ITGB1P05556 798 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 GALTP07902 379 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 CYLC1P35663 651 aaPredicted RBP21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 SLC11A1P49279 550 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 PDE6CP51160 858 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 NDST1P52848 882 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 ASTE1Q2TB18 679 aaPredicted RBP21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 CMTR2Q8IYT2 770 aaKnown RBP21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 PDCL2Q8N4E4 241 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 EPS8L1Q8TE68 723 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 KBTBD7Q8WVZ9 684 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 CWH43Q9H720 699 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 PYCARDQ9ULZ3 195 aa21.47■■□□□ 1.03
SIGMAR1-202ENST00000353468 I3L4J1 428 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 GJB5O95377 273 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 WARSP23381 471 aaKnown RBP21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 RAD23BP54727 409 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 BTG3Q14201 252 aaPredicted RBP21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 WSCD1Q658N2 575 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 NOP9Q86U38 636 aaKnown RBP21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 ADGRF2Q8IZF7 708 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 OR6B3Q8NGW1 331 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 SUSD3Q96L08 255 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 TWNKQ96RR1 684 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 YME1L1Q96TA2 773 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms