RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ALDH2P05091 517 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 LINC00271P0C7V0 271 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 TNNC1P63316 161 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 SOWAHAQ2M3V2 549 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 IQCDQ96DY2 449 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 SENP8Q96LD8 212 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 MRPL45Q9BRJ2 306 aaKnown RBP20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 UBE2OQ9C0C9 1292 aaKnown RBP20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 MTIF3Q9H2K0 278 aaKnown RBP20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 L1RE1Q9UN81 338 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 COLQQ9Y215 455 aaPredicted RBP20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 FAN1Q9Y2M0 1017 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 VWA8A3KMH1 1905 aa20.35■□□□□ 0.85
CHMP4A-201ENST00000347519 CYB561D2O14569 222 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 CD58P19256 250 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 RFX1P22670 979 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 TBXAS1P24557 533 aaPredicted RBP20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 OSTM1Q86WC4 334 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 SP7Q8TDD2 431 aaPredicted RBP20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 KBTBD7Q8WVZ9 684 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 SPAG5Q96R06 1193 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 MMS19Q96T76 1030 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 RAD9AQ99638 391 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 CISHQ9NSE2 258 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 DAAM1Q9Y4D1 1078 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 INSL6Q9Y581 213 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 HCRTO43612 131 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 TLL1O43897 1013 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 ARHGEF15O94989 841 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 MYOGP15173 224 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 SOX5P35711 763 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 SPOUT1Q5T280 376 aaKnown RBP20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 DSTYKQ6XUX3 929 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 ENOSF1Q7L5Y1 443 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 FAM71AQ8IYT1 594 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 WHAMMQ8TF30 809 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 FAXDC2Q96IV6 333 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 TWNKQ96RR1 684 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 DNAJC7Q99615 494 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 COLEC11Q9BWP8 271 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 CYP3A43Q9HB55 503 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 ACP6Q9NPH0 428 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 ABHD10Q9NUJ1 306 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 HMGXB4Q9UGU5 601 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 PCDHB4Q9Y5E5 795 aa20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 TIMM13Q9Y5L4 95 aaPredicted RBP20.34■□□□□ 0.85
CHMP4A-201ENST00000347519 NLRC5Q86WI3 1866 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 M0QZQ0 153 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 TADA2AO75478 443 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 GFPT2O94808 682 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 TPM1P09493 284 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 P4HA1P13674 534 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 USP8P40818 1118 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 STAT1P42224 750 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 ORC1Q13415 861 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 WSCD1Q658N2 575 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 WDR59Q6PJI9 974 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 KCNT2Q6UVM3 1135 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 PDCL2Q8N4E4 241 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 FIBCD1Q8N539 461 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 COLGALT1Q8NBJ5 622 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 OR8K1Q8NGG5 319 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 SUSD3Q96L08 255 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 GPR62Q9BZJ7 368 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 ADAM28Q9UKQ2 775 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 CNTN6Q9UQ52 1028 aa20.33■□□□□ 0.84
CHMP4A-201ENST00000347519 CYP26A1O43174 497 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 SKILP12757 684 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 CLCN1P35523 988 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 ARID5AQ03989 594 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 SFMBT2Q5VUG0 894 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 IRF2BP2Q7Z5L9 587 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 SPRED2Q7Z698 418 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 CNGA4Q8IV77 575 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 SLC39A11Q8N1S5 342 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 TOP6BLQ8N6T0 577 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 ZNF397Q8NF99 534 aaPredicted RBP20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 JAKMIP2Q96AA8 810 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 FAM81BQ96LP2 452 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 VN1R3Q9BXE9 311 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 ELOVL4Q9GZR5 314 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 AIPL1Q9NZN9 384 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 MYO6Q9UM54 1294 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 TRIOBPQ9H2D6 2365 aa20.32■□□□□ 0.84
CHMP4A-201ENST00000347519 HUS1O60921 280 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 CILPO75339 1184 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 EFEMP2O95967 443 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 KRT5P13647 590 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 ZNF132P52740 706 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 NDST1P52848 882 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 GSDMDP57764 484 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 INCA1Q0VD86 236 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 ASIC2Q16515 512 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 ZNF394Q53GI3 561 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 TMEM270Q6UE05 265 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 CHRDL2Q6WN34 429 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 TAS1R1Q7RTX1 841 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 ADGRF2Q8IZF7 708 aa20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 RBBP8NLQ8NC74 664 aaPredicted RBP20.31■□□□□ 0.84
CHMP4A-201ENST00000347519 APPL2Q8NEU8 664 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms