RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 ARPP19P56211 112 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 MYL6P60660 151 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 ZACNQ401N2 412 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 CT47A1Q5JQC4 288 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 MMS19Q96T76 1030 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 UBE2ZQ9H832 354 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 COG5Q9UP83 839 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 BACE2Q9Y5Z0 518 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 XIRP2A4UGR9 3374 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 GLUD1P00367 558 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 KCNA5P22460 613 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 CLCN4P51793 760 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 WDR72Q3MJ13 1102 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 WSCD1Q658N2 575 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 KRT39Q6A163 491 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 CASP10Q92851 521 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 MED15Q96RN5 788 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 TMEM8AQ9HCN3 771 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 GDAP2Q9NXN4 497 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 BARX2Q9UMQ3 279 aaPredicted RBP22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 LETM1O95202 739 aaPredicted RBP22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 EPCAMP16422 314 aa22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 ATICP31939 592 aa22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 GTF2H1P32780 548 aa22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 TNNC1P63316 161 aa22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 MRPL58Q14197 206 aaKnown RBP22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 CTC1Q2NKJ3 1217 aa22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 ZNF699Q32M78 642 aa22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 VN1R2Q8NFZ6 395 aa22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 NXF1Q9UBU9 619 aaKnown RBP22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 FBXL5Q9UKA1 691 aa22.36■■□□□ 1.17
SMARCB1-202ENST00000344921 ADAM12O43184 909 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 OAZ2O95190 189 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 VNN1O95497 513 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 GLP2RO95838 553 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 CYP11A1P05108 521 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 SPATA31D3P0C874 917 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 MXI1P50539 228 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 SGSM1Q2NKQ1 1148 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 RSPO2Q6UXX9 243 aaPredicted RBP22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 SPATA31D4Q6ZUB0 917 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 THEM5Q8N1Q8 247 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 IMPG2Q9BZV3 1241 aa22.35■■□□□ 1.17
SMARCB1-202ENST00000344921 H3BQ06 376 aaPredicted RBP22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 TGM5O43548 720 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 HLA-DRAP01903 254 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 CPB1P15086 417 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 TYRO3Q06418 890 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 DLX2Q07687 328 aaPredicted RBP22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 NFKBIBQ15653 356 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 C15orf39Q6ZRI6 1047 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 CCDC150Q8NCX0 1101 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 SLC22A17Q8WUG5 538 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 SLC35C1Q96A29 364 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.34■■□□□ 1.172e-9■■■■■ 167.7
SMARCB1-202ENST00000344921 THEGQ9P2T0 379 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 DPP7Q9UHL4 492 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 L1RE1Q9UN81 338 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 TBX10O75333 385 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 LTBRP36941 435 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 KCNC3Q14003 757 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 COL19A1Q14993 1142 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 ZNF667Q5HYK9 610 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 ELMSAN1Q6PJG2 1045 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 C11orf57Q6ZUT1 292 aaPredicted RBP22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 PDCL2Q8N4E4 241 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 TOP6BLQ8N6T0 577 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 TAS1R2Q8TE23 839 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 ELMO3Q96BJ8 720 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 CNOT6LQ96LI5 555 aaKnown RBP22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 OXCT2Q9BYC2 517 aaPredicted RBP22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 XYLT2Q9H1B5 865 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 DNAJC25Q9H1X3 360 aa22.34■■□□□ 1.17
SMARCB1-202ENST00000344921 MCCD1P59942 119 aaPredicted RBP22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 RAB33AQ14088 237 aa22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 CLUL1Q15846 466 aa22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 SLC8B1Q6J4K2 584 aa22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 TMEM184AQ6ZMB5 413 aa22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 DPH6Q7L8W6 267 aa22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 ADGRF2Q8IZF7 708 aa22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 TMEM86AQ8N2M4 240 aa22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 THAP9Q9H5L6 903 aa22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 MAN1C1Q9NR34 630 aa22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 MAGEC2Q9UBF1 373 aaPredicted RBP22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.33■■□□□ 1.17
SMARCB1-202ENST00000344921 SYCE3A1L190 88 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 TBC1D4O60343 1298 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 STAU1O95793 577 aaKnown RBP22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 MARSP56192 900 aaKnown RBP22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 ROR1Q01973 937 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 TFF2Q03403 129 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 SOWAHAQ2M3V2 549 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 HSP90AA4PQ58FG1 418 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 FAM114A1Q8IWE2 563 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 FBXL13Q8NEE6 735 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 TAF4BQ92750 862 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 PI4K2AQ9BTU6 479 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 CLEC1BQ9P126 229 aa22.32■■□□□ 1.16
SMARCB1-202ENST00000344921 PLXNA3P51805 1871 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms