RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 I3L4J1 428 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 PRPF40AO75400 957 aaKnown RBP19.49■□□□□ 0.71
USF2-202ENST00000343550 C8AP07357 584 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 SRFP11831 508 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 UBE2HP62256 183 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 RAB33AQ14088 237 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 CLEC17AQ6ZS10 378 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 NT5DC4Q86YG4 428 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 C12orf56Q8IXR9 622 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 SPATA20Q8TB22 786 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 NOC3LQ8WTT2 800 aaKnown RBP19.49■□□□□ 0.71
USF2-202ENST00000343550 RTP3Q9BQQ7 232 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 KIAA1586Q9HCI6 787 aa19.49■□□□□ 0.71
USF2-202ENST00000343550 ZFP37Q9Y6Q3 630 aaPredicted RBP19.49■□□□□ 0.71
USF2-202ENST00000343550 MYO15AQ9UKN7 3530 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 STK25O00506 426 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 HOXA9P31269 272 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 OR1D2P34982 312 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 CBWD2Q8IUF1 395 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 EFCAB13Q8IY85 973 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 ERCC4Q92889 916 aaPredicted RBP19.48■□□□□ 0.71
USF2-202ENST00000343550 GSDMAQ96QA5 445 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 MTRRQ9UBK8 725 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 HOOK1Q9UJC3 728 aaKnown RBP19.48■□□□□ 0.71
USF2-202ENST00000343550 NUB1Q9Y5A7 615 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 PCDHA5Q9Y5H7 936 aa19.48■□□□□ 0.71
USF2-202ENST00000343550 ANO9A1A5B4 782 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 KRBA1A5PL33 1030 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 PDXKO00764 312 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 KINO60870 393 aaKnown RBP19.47■□□□□ 0.71
USF2-202ENST00000343550 CYP2J2P51589 502 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 HTR4Q13639 388 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 UVSSAQ2YD98 709 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 XXYLT1Q8NBI6 393 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 RDH13Q8NBN7 331 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 GOLGA5Q8TBA6 731 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 TMEM174Q8WUU8 243 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 SUSD3Q96L08 255 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 PDE11AQ9HCR9 933 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 DPP3Q9NY33 737 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 MAPK8IP1Q9UQF2 711 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 NUMBLQ9Y6R0 609 aa19.47■□□□□ 0.71
USF2-202ENST00000343550 TULP1O00294 542 aaPredicted RBP19.46■□□□□ 0.71
USF2-202ENST00000343550 PIRO00625 290 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 PPEF2O14830 753 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 CCL16O15467 120 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 XYLBO75191 536 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 KIF20AO95235 890 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 SMC2O95347 1197 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 TKTP29401 623 aaKnown RBP19.46■□□□□ 0.71
USF2-202ENST00000343550 NBL1P41271 181 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 NTHL1P78549 312 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 C9orf57Q5W0N0 161 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 RSPO2Q6UXX9 243 aaPredicted RBP19.46■□□□□ 0.71
USF2-202ENST00000343550 ANKS3Q6ZW76 656 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 CCDC105Q8IYK2 499 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 ST13P5Q8NFI4 369 aaPredicted RBP19.46■□□□□ 0.71
USF2-202ENST00000343550 SLC7A14Q8TBB6 771 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 GPR152Q8TDT2 470 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 DMAC2Q9NW81 257 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 CDH7Q9ULB5 785 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 CA14Q9ULX7 337 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 POLIQ9UNA4 740 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 BACE2Q9Y5Z0 518 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 CDY1Q9Y6F8 540 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 MCM4P33991 863 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 LILRA4P59901 499 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 SNRNP35Q16560 246 aaKnown RBP19.46■□□□□ 0.71
USF2-202ENST00000343550 GUF1Q8N442 669 aaKnown RBP19.46■□□□□ 0.71
USF2-202ENST00000343550 DTWD2Q8NBA8 298 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 CACTINQ8WUQ7 758 aaKnown RBP19.46■□□□□ 0.71
USF2-202ENST00000343550 SMARCE1Q969G3 411 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 RMND1Q9NWS8 449 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 TRAF3IP3Q9Y228 551 aa19.46■□□□□ 0.71
USF2-202ENST00000343550 DOCK8Q8NF50 2099 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 VWA8A3KMH1 1905 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 ZFHX2Q9C0A1 2572 aaPredicted RBP19.45■□□□□ 0.7
USF2-202ENST00000343550 SYN3O14994 580 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 POU2F2P09086 479 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 RFX1P22670 979 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 AARSP49588 968 aaKnown RBP eCLIP19.45■□□□□ 0.7
USF2-202ENST00000343550 TFAMQ00059 246 aaKnown RBP19.45■□□□□ 0.7
USF2-202ENST00000343550 SURF1Q15526 300 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 RTL10Q7L3V2 364 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 SLC9A9Q8IVB4 645 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 FGF13Q92913 245 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 RPP25Q9BUL9 199 aaKnown RBP19.45■□□□□ 0.7
USF2-202ENST00000343550 SLC2A4RGQ9NR83 387 aa19.45■□□□□ 0.7
USF2-202ENST00000343550 M0QZQ0 153 aa19.44■□□□□ 0.7
USF2-202ENST00000343550 EXOC3O60645 756 aa19.44■□□□□ 0.7
USF2-202ENST00000343550 MRPL58Q14197 206 aaKnown RBP19.44■□□□□ 0.7
USF2-202ENST00000343550 ZNF658Q5TYW1 1059 aaPredicted RBP19.44■□□□□ 0.7
USF2-202ENST00000343550 PARM1Q6UWI2 310 aa19.44■□□□□ 0.7
USF2-202ENST00000343550 ASCL5Q7RTU5 278 aa19.44■□□□□ 0.7
USF2-202ENST00000343550 SMYD4Q8IYR2 804 aaPredicted RBP19.44■□□□□ 0.7
USF2-202ENST00000343550 ITFG1Q8TB96 612 aa19.44■□□□□ 0.7
USF2-202ENST00000343550 FGF14Q92915 247 aa19.44■□□□□ 0.7
USF2-202ENST00000343550 TBC1D17Q9HA65 648 aa19.44■□□□□ 0.7
USF2-202ENST00000343550 SPTLC1O15269 473 aa19.43■□□□□ 0.7
USF2-202ENST00000343550 PAX3P23760 479 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms