RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ALDH3A1P30838 453 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 NOVP48745 357 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 GMPSP49915 693 aaPredicted RBP13.25□□□□□ -0.29
LMX1A-202ENST00000342310 PEX5P50542 639 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 CLCN3P51790 818 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 ZNF568Q3ZCX4 644 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 C3orf62Q6ZUJ4 267 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 ZNF606Q8WXB4 792 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 RMDN2Q96LZ7 410 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 POLIQ9UNA4 740 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 PIK3CDO00329 1044 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 DHX15O43143 795 aaKnown RBP13.25□□□□□ -0.29
LMX1A-202ENST00000342310 GGPS1O95749 300 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 CUL2Q13617 745 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 MPP2Q14168 576 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 DPY19L2P1Q6NXN4 242 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 CNPY4Q8N129 248 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 VPS52Q8N1B4 723 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 MCPH1Q8NEM0 835 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 ASAP3Q8TDY4 903 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 PRPF31Q8WWY3 499 aaKnown RBP13.25□□□□□ -0.29
LMX1A-202ENST00000342310 ZNF516Q92618 1163 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 MCUR1Q96AQ8 359 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 CYTH2Q99418 400 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 DCLK3Q9C098 648 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 FAM49BQ9NUQ9 324 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 AKT3Q9Y243 479 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 DIS3Q9Y2L1 958 aaKnown RBP13.25□□□□□ -0.29
LMX1A-202ENST00000342310 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
LMX1A-202ENST00000342310 DGAT1O75907 488 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 ALDH5A1P51649 535 aaPredicted RBP13.25□□□□□ -0.29
LMX1A-202ENST00000342310 TNFAIP1Q13829 316 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 TFDP1Q14186 410 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 ANKRD20A3Q5VUR7 823 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 BTNL9Q6UXG8 535 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 ISLR2Q6UXK2 745 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 CEP41Q9BYV8 373 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 NR2E3Q9Y5X4 410 aa13.25□□□□□ -0.29
LMX1A-202ENST00000342310 LRP5O75197 1615 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 PTPRJQ12913 1337 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 VWA5AO00534 786 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 RNF8O76064 485 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 CETPP11597 493 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 GZMAP12544 262 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 ITIH2P19823 946 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 YARSP54577 528 aaKnown RBP13.24□□□□□ -0.29
LMX1A-202ENST00000342310 BPIFB4P59827 614 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 KRT81Q14533 505 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 LVRNQ6Q4G3 990 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 CLEC4DQ8WXI8 215 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 PPP1R36Q96LQ0 422 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 LRRC37BQ96QE4 947 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 FAM49AQ9H0Q0 323 aaPredicted RBP13.24□□□□□ -0.29
LMX1A-202ENST00000342310 NCANO14594 1321 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 DOCK2Q92608 1830 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 WDR46O15213 610 aaKnown RBP13.24□□□□□ -0.29
LMX1A-202ENST00000342310 CDH16O75309 829 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 AVILO75366 819 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 FSBPO95073 299 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 BAG2O95816 211 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 GTF2BQ00403 316 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 NBPF20Q3BBV1 942 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 FAM102AQ5T9C2 384 aaPredicted RBP13.24□□□□□ -0.29
LMX1A-202ENST00000342310 SLC39A4Q6P5W5 647 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 SUGP1Q8IWZ8 645 aaKnown RBP13.24□□□□□ -0.29
LMX1A-202ENST00000342310 ACTL9Q8TC94 416 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 FAM149B1Q96BN6 582 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 RPS6KC1Q96S38 1066 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 UBE4BO95155 1302 aa13.24□□□□□ -0.29
LMX1A-202ENST00000342310 KRT3P12035 628 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 A1CFQ9NQ94 594 aaKnown RBP13.23□□□□□ -0.29
LMX1A-202ENST00000342310 M0QYV0 167 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 TJP3O95049 919 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 RPA3P35244 121 aaPredicted RBP13.23□□□□□ -0.29
LMX1A-202ENST00000342310 STAT5BP51692 787 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 CDH6P55285 790 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 IFRD2Q12894 506 aaPredicted RBP13.23□□□□□ -0.29
LMX1A-202ENST00000342310 TAF5Q15542 800 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 GLRA4Q5JXX5 417 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 NPNTQ6UXI9 565 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 FLAD1Q8NFF5 587 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 COPS5Q92905 334 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 CFAP57Q96MR6 1250 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 APOBEC3GQ9HC16 384 aaKnown RBP13.23□□□□□ -0.29
LMX1A-202ENST00000342310 BTNL10A8MVZ5 291 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 ANP32DO95626 131 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 APRTP07741 180 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 INHBAP08476 426 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 KRT16P08779 473 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 ELF3P78545 371 aaPredicted RBP13.23□□□□□ -0.29
LMX1A-202ENST00000342310 OTUD4Q01804 1114 aaKnown RBP13.23□□□□□ -0.29
LMX1A-202ENST00000342310 STXBP2Q15833 593 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 LRRC36Q1X8D7 754 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 C4orf19Q8IY42 314 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 TMEM35BQ8NCS4 154 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 FEZF2Q8TBJ5 459 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 AGAP11Q8TF27 550 aa13.23□□□□□ -0.29
LMX1A-202ENST00000342310 SENP7Q9BQF6 1050 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms